PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6UTE

#CDRs = 8; #Clusters = 12.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	84.6	H1	13	H1-13-1	10	AASGFPFSTYAMS	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	60.0	H2	10	H2-10-*	-1	GITGDSGSTY	BBAEALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	100.0	H3	15	H3-15-*	-1	AKDRLHSgLGELFSY
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	4	RDNSKNTL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	81.8	L1	11	L1-11-2	10	RASQSINQWLA	BBABBALLBBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	75.0	L2	8	L2-8-1	14	YKASTLET	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	57.1	L3	9	L3-9-2	14	QHYFSYPWT	BBBABABBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	10	GSGTEF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	84.6	H1	13	H1-13-1	11	AASGFPFSTYAMS	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	60.0	H2	10	H2-10-*	-1	GITGDSGSTY	BBALALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	100.0	H3	15	H3-15-*	-1	AKDRLHSgLGELFSY
C	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	81.8	L1	11	L1-11-*	-1	RASQSINQWLA	BBABBBAABBB
D	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	75.0	L2	8	L2-8-1	14	YKASTLET	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	57.1	L3	9	L3-9-2	11	QHYFSYPWT	BBAABABBB
D	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	15	GSGTEF	EBEABB
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	84.6	H1	13	H1-13-1	11	AASGFPFSTYAMS	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	60.0	H2	10	H2-10-2	12	GITGDSGSTY	BBBAALABBB
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	100.0	H3	15	H3-15-*	-1	AKDRLHSgLGELFSY
E	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	5	RDNSKNTL	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	81.8	L1	11	L1-11-1	24	RASQSINQWLA	BBABBALABBB
F	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	75.0	L2	8	L2-8-1	13	YKASTLET	BLLABBBB
F	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	57.1	L3	9	L3-9-2	13	QHYFSYPWT	BBAABABBB
F	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	10	GSGTEF	EBEABB
G	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	84.6	H1	13	H1-13-1	11	AASGFPFSTYAMS	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	60.0	H2	10	H2-10-*	-1	GITGDSGSTY	BBAEALABBB
G	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	100.0	H3	15	H3-15-*	-1	AKDRLHSgLGELFSY
G	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
H	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	81.8	L1	11	L1-11-*	-1	RASQSINQWLA	BBABBAEABBB
H	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	75.0	L2	8	L2-8-1	17	YKASTLET	BLLABBBB
H	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	57.1	L3	9	L3-9-2	11	QHYFSYPWT	BBAABABBB
H	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	10	GSGTEF	EBEABB
I	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	84.6	H1	13	H1-13-1	13	AASGFPFSTYAMS	BBBLBBAAABBBB
I	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	60.0	H2	10	H2-10-*	-1	GITGDSGSTY	BBAEALABBB
I	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	100.0	H3	15	H3-15-*	-1	AKDRLHSgLGELFSY
I	heavy	Homo.sapiens	Hu_IGHV3-23*01	91.8	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	9	RDNSKNTL	BBAAALBB
J	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	81.8	L1	11	L1-11-*	-1	RASQSINQWLA	BBAALBAABBB
J	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	75.0	L2	8	L2-8-1	16	YKASTLET	BLLABBBB
J	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	57.1	L3	9	L3-9-*	-1	QHYFSYPWT	BBBAAABBB
J	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.7	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	11	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022