PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6UTA

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H1	13	H1-13-*	-1	AASGFTFSSYAMS	BBAABBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H2	10	H2-10-2	12	AISGSGGSTY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H3	15	H3-15-*	-1	AKDRGPRgVGELFDY
A	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	7	RDNSKNTL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	100.0	Hu_IGKV1-5*03	100.0	L1	11	L1-11-1	9	RASQSISSWLA	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	100.0	Hu_IGKV1-5*03	100.0	L2	8	L2-8-1	11	YKASSLES	BLEABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	100.0	Hu_IGKV1-5*03	85.7	L3	9	L3-9-cis7-1	12	QQYNSYPWT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	100.0	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	13	GSGTEF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H1	13	H1-13-*	-1	AASGFTFSSYAMS	BBAABBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H2	10	H2-10-2	10	AISGSGGSTY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H3	15	H3-15-*	-1	AKDRGPRgVGELFDY
H	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	10	RDNSKNTL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	100.0	Hu_IGKV1-5*03	100.0	L1	11	L1-11-1	11	RASQSISSWLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	100.0	Hu_IGKV1-5*03	100.0	L2	8	L2-8-1	11	YKASSLES	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	100.0	Hu_IGKV1-5*03	85.7	L3	9	L3-9-cis7-1	15	QQYNSYPWT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-5*03	100.0	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	11	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022