PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6UQR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	54.5	L1	11	L1-11-1	14	RASQSIGTNIH	BBABBAEABBB
A	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	37.5	L2	8	L2-8-1	23	YYASESIS	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	57.1	L3	9	L3-9-cis7-1	14	QQSWSWPTT	BBAABBbBB
A	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	100.0	L4	6	L4-6-1	17	GSGTEF	EBEABB
A	heavy	Homo.sapiens	Hu_IGHV1-69*15	89.0	Hu_IGHV1-69*15	61.5	H1	13	H1-13-1	14	KASGYTFSWYWLE	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*15	89.0	Hu_IGHV1-69*15	40.0	H2	10	H2-10-1	10	EIDPGTFTTN	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-69*15	89.0	Hu_IGHV1-69*15	100.0	H3	16	H3-16-*	-1	ARFSHfsGSNYDYFDY
A	heavy	Homo.sapiens	Hu_IGHV1-69*15	89.0	Hu_IGHV1-69*15	87.5	H4	8	H4-8-1	11	ADTSTSTA	BBAAALBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*15	89.0	Hu_IGHV1-69*15	61.5	H1	13	H1-13-1	14	KASGYTFSWYWLE	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*15	89.0	Hu_IGHV1-69*15	40.0	H2	10	H2-10-1	10	EIDPGTFTTN	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*15	89.0	Hu_IGHV1-69*15	100.0	H3	16	H3-16-*	-1	ARFSHfsGSNYDYFDY
C	heavy	Homo.sapiens	Hu_IGHV1-69*15	89.0	Hu_IGHV1-69*15	87.5	H4	8	H4-8-1	11	ADTSTSTA	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	54.5	L1	11	L1-11-1	15	RASQSIGTNIH	BBABBAEABBB
C	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	37.5	L2	8	L2-8-1	23	YYASESIS	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	57.1	L3	9	L3-9-cis7-1	14	QQSWSWPTT	BBAABBbBB
C	kappa	Homo.sapiens	Hu_IGKV3-15*01	100.0	Hu_IGKV3-15*01	100.0	L4	6	L4-6-1	17	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022