PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6UM6

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV1-2*07	82.2	Hu_IGHV1-2*07	61.5	H1	13	H1-13-*	-1	APSGYTFTDFYIH	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV1-2*07	82.2	Hu_IGHV1-2*07	60.0	H2	10	H2-10-1	12	WMNPQTGRTN	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV1-2*07	82.2	Hu_IGHV1-2*07	0.0	H3	20	H3-20-*	-1	TTGGwislyyDSSYYPNFDH
C	heavy	Homo.sapiens	Hu_IGHV1-2*07	82.2	Hu_IGHV1-2*07	87.5	H4	8	H4-8-1	27	RDTSIGTA	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.1	Hu_IGLV2-14*02	71.4	L1	14	L1-14-2	22	TGTKYDVGSHdLVS	BBBAAAAAABBBBB
D	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.1	Hu_IGLV2-14*02	75.0	L2	8	L2-8-*	-1	YEVNKRPS	BBABBBBB
D	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.1	Hu_IGLV2-14*02	33.3	L3	10	L3-10-*	-1	CSFGGSATVV	BBBBAAABBB
D	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.1	Hu_IGLV2-14*02	100.0	L4	6	L4-6-2	16	KSGNTA	BBEABB
G	heavy	Homo.sapiens	Hu_IGHV1-2*07	82.2	Hu_IGHV1-2*07	61.5	H1	13	H1-13-*	-1	APSGYTFTDFYIH	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV1-2*07	82.2	Hu_IGHV1-2*07	60.0	H2	10	H2-10-1	12	WMNPQTGRTN	BBBAAALBBB
G	heavy	Homo.sapiens	Hu_IGHV1-2*07	82.2	Hu_IGHV1-2*07	0.0	H3	20	H3-20-*	-1	TTGGwislyyDSSYYPNFDH
G	heavy	Homo.sapiens	Hu_IGHV1-2*07	82.2	Hu_IGHV1-2*07	87.5	H4	8	H4-8-1	27	RDTSIGTA	BBAAALBB
H	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.1	Hu_IGLV2-14*02	71.4	L1	14	L1-14-2	22	TGTKYDVGSHdLVS	BBBAAAAAABBBBB
H	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.1	Hu_IGLV2-14*02	75.0	L2	8	L2-8-*	-1	YEVNKRPS	BBABBBBB
H	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.1	Hu_IGLV2-14*02	33.3	L3	10	L3-10-*	-1	CSFGGSATVV	BBBBAAABBB
H	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.1	Hu_IGLV2-14*02	100.0	L4	6	L4-6-2	16	KSGNTA	BBEABB
K	heavy	Homo.sapiens	Hu_IGHV1-2*07	82.2	Hu_IGHV1-2*07	61.5	H1	13	H1-13-*	-1	APSGYTFTDFYIH	BBBLBBAAABBBB
K	heavy	Homo.sapiens	Hu_IGHV1-2*07	82.2	Hu_IGHV1-2*07	60.0	H2	10	H2-10-1	12	WMNPQTGRTN	BBBAAALBBB
K	heavy	Homo.sapiens	Hu_IGHV1-2*07	82.2	Hu_IGHV1-2*07	0.0	H3	20	H3-20-*	-1	TTGGwislyyDSSYYPNFDH
K	heavy	Homo.sapiens	Hu_IGHV1-2*07	82.2	Hu_IGHV1-2*07	87.5	H4	8	H4-8-1	27	RDTSIGTA	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.1	Hu_IGLV2-14*02	71.4	L1	14	L1-14-2	22	TGTKYDVGSHdLVS	BBBAAAAAABBBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.1	Hu_IGLV2-14*02	75.0	L2	8	L2-8-*	-1	YEVNKRPS	BBABBBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.1	Hu_IGLV2-14*02	33.3	L3	10	L3-10-*	-1	CSFGGSATVV	BBBBAAABBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*02	94.1	Hu_IGLV2-14*02	100.0	L4	6	L4-6-2	16	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022