PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6ULE

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	100.0	H1	13	H1-13-1	13	AASGFTFSSYGMH	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	70.0	H2	10	H2-10-2	7	IIWHDGSKKY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	100.0	H3	16	H3-16-*	-1	ARVGDYSdfKYGAFDI
A	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L1	11	L1-11-1	9	RASQSISSWLA	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	87.5	L2	8	L2-8-1	6	YKASTLES	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	85.7	L3	8	L3-8-1	6	QQYNSYWT	BBAABEBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	9	GSGTEF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	100.0	H1	13	H1-13-1	9	AASGFTFSSYGMH	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	70.0	H2	10	H2-10-2	7	IIWHDGSKKY	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	100.0	H3	16	H3-16-*	-1	ARVGDYSdfKYGAFDI
C	heavy	Homo.sapiens	Hu_IGHV3-33*01	93.2	Hu_IGHV3-33*01	100.0	H4	8	H4-8-1	11	RDNSKNTL	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L1	11	L1-11-1	12	RASQSISSWLA	BBABBAEABBB
D	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	87.5	L2	8	L2-8-*	-1	YKASTLES	BLLABBBA
D	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	85.7	L3	8	L3-8-1	9	QQYNSYWT	BBAABEBB
D	kappa	Homo.sapiens	Hu_IGKV1-5*03	98.6	Hu_IGKV1-5*03	100.0	L4	6	L4-6-1	11	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022