PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6UIG

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV4-61*02	97.3	Hu_IGHV4-61*02	66.7	H1	15	H1-15-2	19	TVSGGSINSshSFWS	BBBLEBAABAABBBB
B	heavy	Homo.sapiens	Hu_IGHV4-61*02	97.3	Hu_IGHV4-61*02	55.6	H2	9	H2-9-1	8	RIYSTGNSN	BBBAALBBB
B	heavy	Homo.sapiens	Hu_IGHV4-61*02	97.3	Hu_IGHV4-61*02	100.0	H3	16	H3-16-*	-1	ARESlwNPDYYYYMDV
B	heavy	Homo.sapiens	Hu_IGHV4-61*02	97.3	Hu_IGHV4-61*02	87.5	H4	8	H4-8-1	13	LDTSKNQF	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	81.8	L1	11	L1-11-*	-1	RASQSFSSHLN	BBABBBBLBBB
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	8	YAASSLHS	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	85.7	L3	9	L3-9-cis7-1	10	QQSYSVPYT	BBAABBbBB
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	17	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV4-61*02	97.3	Hu_IGHV4-61*02	66.7	H1	15	H1-15-2	19	TVSGGSINSshSFWS	BBBLEBAABAABBBB
H	heavy	Homo.sapiens	Hu_IGHV4-61*02	97.3	Hu_IGHV4-61*02	55.6	H2	9	H2-9-1	11	RIYSTGNSN	BBBAALBBB
H	heavy	Homo.sapiens	Hu_IGHV4-61*02	97.3	Hu_IGHV4-61*02	100.0	H3	16	H3-16-*	-1	ARESlwNPDYYYYMDV
H	heavy	Homo.sapiens	Hu_IGHV4-61*02	97.3	Hu_IGHV4-61*02	87.5	H4	8	H4-8-1	11	LDTSKNQF	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	81.8	L1	11	L1-11-2	19	RASQSFSSHLN	BBABBALLBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	7	YAASSLHS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	85.7	L3	9	L3-9-cis7-1	12	QQSYSVPYT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	94.2	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	17	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022