PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6UHT

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Vicugna.pacos	Al_IGHV3S63*01_VHH	93.2	CDRLenMismatch	-1.0	H1	15	H1-15-*	-1	AASilTYDLDYYYIG	BAABLAAABABBBBB
C	heavy	Vicugna.pacos	Al_IGHV3S63*01_VHH	93.2	Al_IGHV3S63*01_VHH	80.0	H2	10	H2-10-1	13	CISSTDGATY	BBBAAALBBB
C	heavy	Vicugna.pacos	Al_IGHV3S63*01_VHH	93.2	Al_IGHV3S63*01_VHH	0.0	H3	18	H3-18-*	-1	AAAplagRYCPASHEYGY
C	heavy	Vicugna.pacos	Al_IGHV3S63*01_VHH	93.2	Al_IGHV3S63*01_VHH	87.5	H4	8	H4-8-*	-1	RNNAKNTV	BAEAALBB
D	heavy	Vicugna.pacos	Al_IGHV3S63*01_VHH	93.2	CDRLenMismatch	-1.0	H1	15	H1-15-*	-1	AASilTYDLDYYYIG	BBBBBBAABABBBBB
D	heavy	Vicugna.pacos	Al_IGHV3S63*01_VHH	93.2	Al_IGHV3S63*01_VHH	80.0	H2	10	H2-10-1	13	CISSTDGATY	BBBAAALBBB
D	heavy	Vicugna.pacos	Al_IGHV3S63*01_VHH	93.2	Al_IGHV3S63*01_VHH	0.0	H3	18	H3-18-*	-1	AAAplagRYCPASHEYGY
D	heavy	Vicugna.pacos	Al_IGHV3S63*01_VHH	93.2	Al_IGHV3S63*01_VHH	87.5	H4	8	H4-8-*	-1	RNNAKNTV	BAEAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022