PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6UGU

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Mo_IGHV6-6*02	93.2	Mo_IGHV6-6*02	84.6	H1	13	H1-13-1	10	VASGFIFSNHWMN	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Mo_IGHV6-6*02	93.2	Mo_IGHV6-6*02	75.0	H2	12	H2-12-1	10	EIRSKsiNSATH	BBBBAAALLBBB
A	heavy	Homo.sapiens	Mo_IGHV6-6*02	93.2	Mo_IGHV6-6*02	50.0	H3	11	H3-11-*	-1	SRNYYGSTYDY	BBBBLLBBBAB
A	heavy	Homo.sapiens	Mo_IGHV6-6*02	93.2	Mo_IGHV6-6*02	87.5	H4	8	H4-8-1	3	RDDSKSAV	BBAAALBB
B	kappa	Homo.sapiens	Mo_IGKV5-48*01	98.6	Mo_IGKV5-48*01	72.7	L1	11	L1-11-1	5	RASQFVGSSIH	BBABBAEABBB
B	kappa	Homo.sapiens	Mo_IGKV5-48*01	98.6	Mo_IGKV5-48*01	87.5	L2	8	L2-8-1	8	KYASESMS	BLLABBBB
B	kappa	Homo.sapiens	Mo_IGKV5-48*01	98.6	Mo_IGKV5-48*01	85.7	L3	9	L3-9-cis7-1	8	QQSHSWPFT	BBAABBbBB
B	kappa	Homo.sapiens	Mo_IGKV5-48*01	98.6	Mo_IGKV5-48*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Mo_IGHV6-6*02	93.2	Mo_IGHV6-6*02	84.6	H1	13	H1-13-1	10	VASGFIFSNHWMN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Mo_IGHV6-6*02	93.2	Mo_IGHV6-6*02	75.0	H2	12	H2-12-1	10	EIRSKsiNSATH	BBBBAAALLBBB
H	heavy	Homo.sapiens	Mo_IGHV6-6*02	93.2	Mo_IGHV6-6*02	50.0	H3	11	H3-11-*	-1	SRNYYGSTYDY	BBBBLLBBBAB
H	heavy	Homo.sapiens	Mo_IGHV6-6*02	93.2	Mo_IGHV6-6*02	87.5	H4	8	H4-8-1	4	RDDSKSAV	BBAAALBB
L	kappa	Homo.sapiens	Mo_IGKV5-48*01	98.6	Mo_IGKV5-48*01	72.7	L1	11	L1-11-1	6	RASQFVGSSIH	BBABBAEABBB
L	kappa	Homo.sapiens	Mo_IGKV5-48*01	98.6	Mo_IGKV5-48*01	87.5	L2	8	L2-8-1	7	KYASESMS	BLLABBBB
L	kappa	Homo.sapiens	Mo_IGKV5-48*01	98.6	Mo_IGKV5-48*01	85.7	L3	9	L3-9-cis7-1	8	QQSHSWPFT	BBAABBbBB
L	kappa	Homo.sapiens	Mo_IGKV5-48*01	98.6	Mo_IGKV5-48*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022