PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6UCF

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Homo.sapiens	Hu_IGHV1-2*02	82.9	Hu_IGHV1-2*02	61.5	H1	13	H1-13-1	11	RAFGYTFTGNALH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*02	82.9	Hu_IGHV1-2*02	70.0	H2	10	H2-10-1	9	WINPHSGDTT	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-2*02	82.9	Hu_IGHV1-2*02	100.0	H3	15	H3-15-*	-1	ARDKYYGNeAVGMDV
H	heavy	Homo.sapiens	Hu_IGHV1-2*02	82.9	Hu_IGHV1-2*02	75.0	H4	8	H4-8-1	11	RDKSINTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	92.8	Hu_IGKV1-9*01	63.6	L1	11	L1-11-1	4	RASQGVRNELA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	92.8	Hu_IGKV1-9*01	87.5	L2	8	L2-8-1	8	YYASTLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	92.8	Hu_IGKV1-9*01	57.1	L3	9	L3-9-cis7-1	14	QHMSSYPLT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	92.8	Hu_IGKV1-9*01	83.3	L4	6	L4-6-1	5	GSGTHF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022