PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6U6O

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	86.3	CDRLenMismatch	-1.0	H1	14	H1-14-2	15	DVSGVSISsNYGWG	BBBLBBAABBBBBB
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	86.3	Ma_IGHV4-2*01	40.0	H2	10	H2-10-3	10	TIYGGTGNTY	BBBBEALBBB
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	86.3	Ma_IGHV4-2*01	100.0	H3	15	H3-15-*	-1	ARKITYSSgWYYFDY
H	heavy	Macaca.mulatta	Ma_IGHV4-2*01	86.3	Ma_IGHV4-2*01	75.0	H4	8	H4-8-1	19	KDASKNQF	BBAAALBB
L	kappa	Macaca.mulatta	Ma_IGKV3S6*01	98.6	Ma_IGKV3S6*01	100.0	L1	11	L1-11-1	15	RASQSVSSRLA	BBABBAEABBB
L	kappa	Macaca.mulatta	Ma_IGKV3S6*01	98.6	Ma_IGKV3S6*01	87.5	L2	8	L2-8-1	10	YDASNRAT	BLLABBBB
L	kappa	Macaca.mulatta	Ma_IGKV3S6*01	98.6	Ma_IGKV3S6*01	57.1	L3	8	L3-8-*	-1	QEDHNWST	BBBBABBB
L	kappa	Macaca.mulatta	Ma_IGKV3S6*01	98.6	Ma_IGKV3S6*01	100.0	L4	6	L4-6-1	11	GSGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022