PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6U3Z

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Macaca.mulatta	Ma_IGHV4-2*01	90.4	Ma_IGHV4-2*01	92.3	H1	13	H1-13-*	-1	AVSGASISSNYWS	BBBLBBAABEBBB
A	heavy	Macaca.mulatta	Ma_IGHV4-2*01	90.4	Ma_IGHV4-2*01	50.0	H2	10	H2-10-1	11	RIYDPTDSTD	BBBAAALBBB
A	heavy	Macaca.mulatta	Ma_IGHV4-2*01	90.4	Ma_IGHV4-2*01	100.0	H3	14	H3-14-*	-1	ARGLWSGYFFWFDV	BBBBBBEABBBBAB
A	heavy	Macaca.mulatta	Ma_IGHV4-2*01	90.4	Ma_IGHV4-2*01	75.0	H4	8	H4-8-1	7	KDTSKNHF	BBAAALBB
B	kappa	Macaca.mulatta	Ma_IGKV1-21*01	91.3	Ma_IGKV1-21*01	54.5	L1	11	L1-11-2	7	RASQGIDKELS	BBABBALLBBB
B	kappa	Macaca.mulatta	Ma_IGKV1-21*01	91.3	Ma_IGKV1-21*01	87.5	L2	8	L2-8-1	2	YAASSLQT	BLLABBBB
B	kappa	Macaca.mulatta	Ma_IGKV1-21*01	91.3	Ma_IGKV1-21*01	28.6	L3	9	L3-9-cis7-1	11	LQDYATPYS	BBAABBbBB
B	kappa	Macaca.mulatta	Ma_IGKV1-21*01	91.3	Ma_IGKV1-21*01	100.0	L4	6	L4-6-1	11	GSGTDY	EBEABB
C	heavy	Macaca.mulatta	Ma_IGHV4-2*01	90.4	Ma_IGHV4-2*01	92.3	H1	13	H1-13-*	-1	AVSGASISSNYWS	BBBLBBAABEBBB
C	heavy	Macaca.mulatta	Ma_IGHV4-2*01	90.4	Ma_IGHV4-2*01	50.0	H2	10	H2-10-1	13	RIYDPTDSTD	BBBAAALBBB
C	heavy	Macaca.mulatta	Ma_IGHV4-2*01	90.4	Ma_IGHV4-2*01	100.0	H3	14	H3-14-*	-1	ARGLWSGYFFWFDV	BBBBBBEABBBBAB
C	heavy	Macaca.mulatta	Ma_IGHV4-2*01	90.4	Ma_IGHV4-2*01	75.0	H4	8	H4-8-1	13	KDTSKNHF	BBAAALBB
D	kappa	Macaca.mulatta	Ma_IGKV1-21*01	91.3	Ma_IGKV1-21*01	54.5	L1	11	L1-11-2	6	RASQGIDKELS	BBABBALLBBB
D	kappa	Macaca.mulatta	Ma_IGKV1-21*01	91.3	Ma_IGKV1-21*01	87.5	L2	8	L2-8-1	6	YAASSLQT	BLLABBBB
D	kappa	Macaca.mulatta	Ma_IGKV1-21*01	91.3	Ma_IGKV1-21*01	28.6	L3	9	L3-9-cis7-1	9	LQDYATPYS	BBAABBbBB
D	kappa	Macaca.mulatta	Ma_IGKV1-21*01	91.3	Ma_IGKV1-21*01	100.0	L4	6	L4-6-1	10	GSGTDY	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022