PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6U02

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	90.9	L1	11	L1-11-1	6	RASQSISTYLN	BBABBAEABBB
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	13	YAASSLQG	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L3	10	L3-10-*	-1	QQSYSTPlYT	BBAABBaBBB
C	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
D	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	100.0	H1	13	H1-13-1	7	AASGFTFSSYWMS	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	100.0	H2	10	H2-10-2	11	NIKQDGSEKY	BBBAALABBB
D	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	50.0	H3	11	H3-11-*	-1	ASSTAAEFFDY	BBBABBABBAB
D	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	87.5	H4	8	H4-8-1	6	RHNAKNSL	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	90.9	L1	11	L1-11-1	6	RASQSISTYLN	BBABBAEABBB
F	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	13	YAASSLQG	BLLABBBB
F	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L3	10	L3-10-*	-1	QQSYSTPlYT	BBAABBaBBB
F	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
G	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	100.0	H1	13	H1-13-1	7	AASGFTFSSYWMS	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	100.0	H2	10	H2-10-2	11	NIKQDGSEKY	BBBAALABBB
G	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	50.0	H3	11	H3-11-*	-1	ASSTAAEFFDY	BBBABBABBAB
G	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	87.5	H4	8	H4-8-1	6	RHNAKNSL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	100.0	H1	13	H1-13-1	7	AASGFTFSSYWMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	100.0	H2	10	H2-10-2	11	NIKQDGSEKY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	50.0	H3	11	H3-11-*	-1	ASSTAAEFFDY	BBBABBABBAB
H	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	87.5	H4	8	H4-8-1	6	RHNAKNSL	BBAAALBB
I	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	90.9	L1	11	L1-11-1	6	RASQSISTYLN	BBABBAEABBB
I	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	13	YAASSLQG	BLLABBBB
I	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L3	10	L3-10-*	-1	QQSYSTPlYT	BBAABBaBBB
I	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
K	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	100.0	H1	13	H1-13-1	7	AASGFTFSSYWMS	BBBLBBAAABBBB
K	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	100.0	H2	10	H2-10-2	11	NIKQDGSEKY	BBBAALABBB
K	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	50.0	H3	11	H3-11-*	-1	ASSTAAEFFDY	BBBABBABBAB
K	heavy	Homo.sapiens	Hu_IGHV3-7*01	97.3	Hu_IGHV3-7*01	87.5	H4	8	H4-8-1	6	RHNAKNSL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	90.9	L1	11	L1-11-1	6	RASQSISTYLN	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	13	YAASSLQG	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L3	10	L3-10-*	-1	QQSYSTPlYT	BBAABBaBBB
L	kappa	Homo.sapiens	Hu_IGKV1-39*01	98.6	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022