PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6T3F

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S43*01	95.5	CDRLenMismatch	-1.0	H1	13	H1-13-*	-1	KASGFTLSSYWMC	AALABBAAABBBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S43*01	95.5	Rb_IGHV1S43*01	50.0	H2	10	H2-10-2	21	CLYTNGATTW	BBBAALABBB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S43*01	95.5	Rb_IGHV1S43*01	100.0	H3	13	H3-13-*	-1	ARGSGSGWSWFNI	BBALBABBBBBAB
H	heavy	Oryctolagus.cuniculus	Rb_IGHV1S43*01	95.5	Rb_IGHV1S43*01	87.5	H4	8	H4-8-*	-1	RSTSRNTV	BALAALBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S10*01	92.5	Rb_IGKV1S10*01	63.6	L1	11	L1-11-2	8	QASQNIISSLA	BBABBALLBBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S10*01	92.5	Rb_IGKV1S10*01	75.0	L2	8	L2-8-1	11	YYASTLAS	BLLABBBB
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S10*01	92.5	Rb_IGKV1S10*01	0.0	L3	9	L3-9-*	-1	QSYYYSGIT
L	kappa	Oryctolagus.cuniculus	Rb_IGKV1S10*01	92.5	Rb_IGKV1S10*01	100.0	L4	6	L4-6-1	11	GSGTQF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022