PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6SWR

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Escherichia.coli.(strain.k12)	Al_IGHV3S53*01_VHH	97.3	Al_IGHV3S53*01_VHH	69.2	H1	13	H1-13-*	-1	AASGSILYFNRMG	BBBEBAAABABBB
A	heavy	Escherichia.coli.(strain.k12)	Al_IGHV3S53*01_VHH	97.3	Al_IGHV3S53*01_VHH	88.9	H2	9	H2-9-1	12	AITSGDSTN	BBBAALBBB
A	heavy	Escherichia.coli.(strain.k12)	Al_IGHV3S53*01_VHH	97.3	Al_IGHV3S53*01_VHH	100.0	H3	14	H3-14-*	-1	NAKEKGWSFSLYDY	BBBBBALBABBBBB
A	heavy	Escherichia.coli.(strain.k12)	Al_IGHV3S53*01_VHH	97.3	Al_IGHV3S53*01_VHH	100.0	H4	8	H4-8-1	9	RDNAKNTV	BBAAALBB
D	heavy	Escherichia.coli.(strain.k12)	Al_IGHV3S53*01_VHH	97.3	Al_IGHV3S53*01_VHH	69.2	H1	13	H1-13-*	-1	AASGSILYFNRMG	BBBEBAAABABBB
D	heavy	Escherichia.coli.(strain.k12)	Al_IGHV3S53*01_VHH	97.3	Al_IGHV3S53*01_VHH	88.9	H2	9	H2-9-1	29	AITSGDSTN	BBBAALBBB
D	heavy	Escherichia.coli.(strain.k12)	Al_IGHV3S53*01_VHH	97.3	Al_IGHV3S53*01_VHH	100.0	H3	14	H3-14-*	-1	NAKEKGWSFSLYDY	BBBBBALBABBBBB
D	heavy	Escherichia.coli.(strain.k12)	Al_IGHV3S53*01_VHH	97.3	Al_IGHV3S53*01_VHH	100.0	H4	8	H4-8-1	13	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022