PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6SRX

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
HHH	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	53.8	H1	13	H1-13-*	-1	AASGFTFRYEVAA	BBBLBBBALABAB
HHH	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	50.0	H2	10	H2-10-*	-1	AISGPIPKGY	BBBBaBBBBB
HHH	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	50.0	H3	13	H3-13-*	-1	ARLRADLGLYMDL	BBBBBBABBBBAB
HHH	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	16	RDNSKNTL	BBAAALBB
III	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	53.8	H1	13	H1-13-*	-1	AASGFTFRYEVAA	BBBLBBBALABAB
III	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	50.0	H2	10	H2-10-*	-1	AISGPIPKGY	BBBBaBBBBB
III	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	50.0	H3	13	H3-13-*	-1	ARLRADLGLYMDL	BBBBBBABBBBAB
III	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	16	RDNSKNTL	BBAAALBB
LLL	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	92.3	L1	13	L1-13-1	7	SGSSSNIGNHYVS	BBBAAAAAABBBB
LLL	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	50.0	L2	8	L2-8-1	3	YDNSERTA	BLEABBBB
LLL	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	55.6	L3	11	L3-11-1	10	GTWDELTSNLV	BBBBAAALBBB
LLL	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	100.0	L4	6	L4-6-2	7	KSGTSA	BBEABB
MMM	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	92.3	L1	13	L1-13-1	7	SGSSSNIGNHYVS	BBBAAAAAABBBB
MMM	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	50.0	L2	8	L2-8-1	4	YDNSERTA	BLEABBBB
MMM	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	55.6	L3	11	L3-11-1	10	GTWDELTSNLV	BBBBAAALBBB
MMM	lambda	Homo.sapiens	Hu_IGLV1-51*01	98.5	Hu_IGLV1-51*01	100.0	L4	6	L4-6-2	6	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022