PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6SRV

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
HHH	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	53.8	H1	13	H1-13-1	15	AASGFTFRYDYHV	BBBLBBAAABBBB
HHH	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H2	10	H2-10-2	11	AISGSGGSTY	BBBAALABBB
HHH	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	50.0	H3	13	H3-13-*	-1	ARLRADLGLYMDL	BBBBBAABBBBAB
HHH	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	9	RDNSKNTL	BBAAALBB
III	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	53.8	H1	13	H1-13-3	21	AASGFTFRYDYHV	BBBEAAAAABBBB
III	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H2	10	H2-10-2	18	AISGSGGSTY	BBBAALABBB
III	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	50.0	H3	13	H3-13-*	-1	ARLRADLGLYMDL	BBBBBAABBBBAB
III	heavy	Homo.sapiens	Hu_IGHV3-23*01	100.0	Hu_IGHV3-23*01	100.0	H4	8	H4-8-1	10	RDNSKNTL	BBAAALBB
LLL	lambda	Homo.sapiens	Hu_IGLV1-51*01	97.1	Hu_IGLV1-51*01	84.6	L1	13	L1-13-1	13	SGSSSNIGNHHVS	BBBAAAAAABBBB
LLL	lambda	Homo.sapiens	Hu_IGLV1-51*01	97.1	Hu_IGLV1-51*01	37.5	L2	8	L2-8-1	10	YDTTVLSS	BLLABBBB
LLL	lambda	Homo.sapiens	Hu_IGLV1-51*01	97.1	Hu_IGLV1-51*01	55.6	L3	11	L3-11-1	13	GTWDELTSNLV	BBBBAAALBBB
LLL	lambda	Homo.sapiens	Hu_IGLV1-51*01	97.1	Hu_IGLV1-51*01	100.0	L4	6	L4-6-2	9	KSGTSA	BBEABB
MMM	lambda	Homo.sapiens	Hu_IGLV1-51*01	97.1	Hu_IGLV1-51*01	84.6	L1	13	L1-13-1	14	SGSSSNIGNHHVS	BBBAAAAAABBBB
MMM	lambda	Homo.sapiens	Hu_IGLV1-51*01	97.1	Hu_IGLV1-51*01	37.5	L2	8	L2-8-1	9	YDTTVLSS	BLLABBBB
MMM	lambda	Homo.sapiens	Hu_IGLV1-51*01	97.1	Hu_IGLV1-51*01	55.6	L3	11	L3-11-1	13	GTWDELTSNLV	BBBBAAALBBB
MMM	lambda	Homo.sapiens	Hu_IGLV1-51*01	97.1	Hu_IGLV1-51*01	100.0	L4	6	L4-6-2	8	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022