PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6SGE

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV3-23*04	87.5	Hu_IGHV3-23*04	38.5	H1	13	H1-13-*	-1	AASGYGSTIETMG	BBBEBEBBBABBB
B	heavy	Homo.sapiens	Hu_IGHV3-23*04	87.5	CDRLenMismatch	-1.0	H2	11	H2-11-*	-1	AISRAPGpSQY	BBBABBEABBB
B	heavy	Homo.sapiens	Hu_IGHV3-23*04	87.5	Hu_IGHV3-23*04	50.0	H3	17	H3-17-*	-1	APINNRTMQDSMflwNY
B	heavy	Homo.sapiens	Hu_IGHV3-23*04	87.5	Hu_IGHV3-23*04	87.5	H4	8	H4-8-*	-1	RDNSKNTV	BALAALBB
D	heavy	Homo.sapiens	Hu_IGHV3-23*04	87.5	Hu_IGHV3-23*04	38.5	H1	13	H1-13-*	-1	AASGYGSTIETMG	BBBEBEBBBABBB
D	heavy	Homo.sapiens	Hu_IGHV3-23*04	87.5	CDRLenMismatch	-1.0	H2	11	H2-11-*	-1	AISRAPGpSQY	BBBABBEABBB
D	heavy	Homo.sapiens	Hu_IGHV3-23*04	87.5	Hu_IGHV3-23*04	50.0	H3	17	H3-17-*	-1	APINNRTMQDSMflwNY
D	heavy	Homo.sapiens	Hu_IGHV3-23*04	87.5	Hu_IGHV3-23*04	87.5	H4	8	H4-8-*	-1	RDNSKNTV	BBABALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022