PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6SF6

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV1-7*01	94.5	Mo_IGHV1-7*01	84.6	H1	13	H1-13-1	10	KASGYTFTNYWVH	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV1-7*01	94.5	Mo_IGHV1-7*01	60.0	H2	10	H2-10-1	10	YINPSNTYIS	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV1-7*01	94.5	Mo_IGHV1-7*01	100.0	H3	16	H3-16-*	-1	ARGGffYDYDVWYFDV
A	heavy	Mus.musculus	Mo_IGHV1-7*01	94.5	Mo_IGHV1-7*01	100.0	H4	8	H4-8-1	8	ADKSSSTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	93.8	L1	16	L1-16-1	10	RSSQNIvhsngNTYLE	BBABBABBAALBBBBB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	6	YKVSNRFS	BLEABBBB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	11	FQGSHVPFT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB
H	heavy	Mus.musculus	Mo_IGHV1-7*01	94.5	Mo_IGHV1-7*01	84.6	H1	13	H1-13-1	10	KASGYTFTNYWVH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-7*01	94.5	Mo_IGHV1-7*01	60.0	H2	10	H2-10-1	10	YINPSNTYIS	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-7*01	94.5	Mo_IGHV1-7*01	100.0	H3	16	H3-16-*	-1	ARGGffYDYDVWYFDV
H	heavy	Mus.musculus	Mo_IGHV1-7*01	94.5	Mo_IGHV1-7*01	100.0	H4	8	H4-8-1	7	ADKSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	93.8	L1	16	L1-16-1	10	RSSQNIvhsngNTYLE	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	6	YKVSNRFS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	12	FQGSHVPFT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	98.6	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	9	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022