PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6RNN

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	93.3	L1	15	L1-15-*	-1	RASQTVStssySYMH	BBABBABBAABBBBB
C	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	87.5	L2	8	L2-8-1	6	YYASNLES	BLLABBBB
C	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	85.7	L3	9	L3-9-cis7-1	10	QHSWDIPPT	BBAABBbBB
C	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB
D	heavy	Mus.musculus	Mo_IGHV3-5*02	94.4	Mo_IGHV3-5*02	100.0	H1	15	H1-15-*	-1	TVTGISITtgNYRWS	BBBLBBAABEABBBB
D	heavy	Mus.musculus	Mo_IGHV3-5*02	94.4	Mo_IGHV3-5*02	77.8	H2	9	H2-9-1	9	YISYSDTIT	BBBAALBBB
D	heavy	Mus.musculus	Mo_IGHV3-5*02	94.4	Mo_IGHV3-5*02	100.0	H3	12	H3-12-*	-1	AREGVLHWYFAV	BBBBAAELBBAB
D	heavy	Mus.musculus	Mo_IGHV3-5*02	94.4	Mo_IGHV3-5*02	62.5	H4	8	H4-8-1	9	RDISRNQI	BBAAALBB
H	heavy	Mus.musculus	Mo_IGHV3-5*02	94.4	Mo_IGHV3-5*02	100.0	H1	15	H1-15-*	-1	TVTGISITtgNYRWS	BBBLBBAABLLBBBB
H	heavy	Mus.musculus	Mo_IGHV3-5*02	94.4	Mo_IGHV3-5*02	77.8	H2	9	H2-9-1	10	YISYSDTIT	BBBAALBBB
H	heavy	Mus.musculus	Mo_IGHV3-5*02	94.4	Mo_IGHV3-5*02	100.0	H3	12	H3-12-*	-1	AREGVLHWYFAV	BBBBAAELBBAB
H	heavy	Mus.musculus	Mo_IGHV3-5*02	94.4	Mo_IGHV3-5*02	62.5	H4	8	H4-8-1	6	RDISRNQI	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	93.3	L1	15	L1-15-*	-1	RASQTVStssySYMH	BBABBABALABBBBB
L	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	87.5	L2	8	L2-8-1	5	YYASNLES	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	85.7	L3	9	L3-9-cis7-1	13	QHSWDIPPT	BBBABBbBB
L	kappa	Mus.musculus	Mo_IGKV3-7*01	97.1	Mo_IGKV3-7*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022