PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6RCS

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	100.0	H1	13	H1-13-1	11	KASGYTFTSYGIS	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	80.0	H2	10	H2-10-1	14	WISGYDGNTN	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	100.0	H3	22	H3-22-*	-1	ARDGpqvgdfdwQVYYYYGMDV
A	heavy	Homo.sapiens	Hu_IGHV1-18*01	98.6	Hu_IGHV1-18*01	100.0	H4	8	H4-8-1	6	TDTSTSTA	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.6	Hu_IGKV1-5*03	81.8	L1	11	L1-11-*	-1	RasqsiNTWLA
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.6	Hu_IGKV1-5*03	87.5	L2	8	L2-8-*	-1	SKASSLes
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.6	Hu_IGKV1-5*03	85.7	L3	9	L3-9-1	20	QQYNSYLYT	BBBBLLBBB
B	kappa	Homo.sapiens	Hu_IGKV1-5*03	95.6	Hu_IGKV1-5*03	100.0	L4	6	L4-6-*	-1	GSGTEF	ABAABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022