PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6QV1

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	93.0	Al_IGHV3S53*01_VHH	46.2	H1	13	H1-13-1	19	AASVRDISFFAVG	BBBLBBAAABBBB
E	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	93.0	Al_IGHV3S53*01_VHH	33.3	H2	9	H2-9-1	32	QMTSLRKIN	BBBAALBBB
E	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	93.0	Al_IGHV3S53*01_VHH	50.0	H3	9	H3-9-*	-1	HASLPGLPY	BBBEBLBBB
E	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	93.0	Al_IGHV3S53*01_VHH	87.5	H4	8	H4-8-1	15	RDDAKNTV	BBAAALBB
F	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	93.0	Al_IGHV3S53*01_VHH	46.2	H1	13	H1-13-1	20	AASVRDISFFAVG	BBBLBBAAABBBB
F	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	93.0	Al_IGHV3S53*01_VHH	33.3	H2	9	H2-9-1	32	QMTSLRKIN	BBBAALBBB
F	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	93.0	Al_IGHV3S53*01_VHH	50.0	H3	9	H3-9-*	-1	HASLPGLPY	BBBEBLBBB
F	heavy	Vicugna.pacos	Al_IGHV3S53*01_VHH	93.0	Al_IGHV3S53*01_VHH	87.5	H4	8	H4-8-1	19	RDDAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022