PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6QN8

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Bos.taurus	Bo_IGHV1-14*01	97.3	Bo_IGHV1-14*01	76.9	H1	13	H1-13-1	11	TVSGLSLSDHNVG	BBBLBBAAABBBB
A	heavy	Bos.taurus	Bo_IGHV1-14*01	97.3	Bo_IGHV1-14*01	44.4	H2	9	H2-9-1	12	VIYKEGDKD	BBBAALBBB
A	heavy	Bos.taurus	Bo_IGHV1-14*01	97.3	Bo_IGHV1-14*01	50.0	H3	27	H3-27-*	-1	ATlgcyfvegvgydcTYGLQHTTFHDA
A	heavy	Bos.taurus	Bo_IGHV1-14*01	97.3	Bo_IGHV1-14*01	100.0	H4	8	H4-8-1	5	KDNSKSQV	BBAAALBB
B	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	69.2	L1	13	L1-13-1	11	SGSSDNIGIFAVG	BBBAAAAAABBBB
B	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	62.5	L2	8	L2-8-1	9	YGNTKRPS	BLEABBBB
B	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	0.0	L3	11	L3-11-*	-1	VCGESKSATPV	BBBBAABABBB
B	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	100.0	L4	6	L4-6-2	6	KSGNTA	BBEABB
C	heavy	Bos.taurus	Bo_IGHV1-14*01	97.3	Bo_IGHV1-14*01	76.9	H1	13	H1-13-1	12	TVSGLSLSDHNVG	BBBLBBAAABBBB
C	heavy	Bos.taurus	Bo_IGHV1-14*01	97.3	Bo_IGHV1-14*01	44.4	H2	9	H2-9-1	12	VIYKEGDKD	BBBAALBBB
C	heavy	Bos.taurus	Bo_IGHV1-14*01	97.3	Bo_IGHV1-14*01	50.0	H3	27	H3-27-*	-1	ATlgcyfvegvgydcTYGLQHTTFHDA
C	heavy	Bos.taurus	Bo_IGHV1-14*01	97.3	Bo_IGHV1-14*01	100.0	H4	8	H4-8-1	5	KDNSKSQV	BBAAALBB
D	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	69.2	L1	13	L1-13-1	11	SGSSDNIGIFAVG	BBBAAAAAABBBB
D	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	62.5	L2	8	L2-8-1	10	YGNTKRPS	BLEABBBB
D	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	0.0	L3	11	L3-11-*	-1	VCGESKSATPV	BBBBEBAABBB
D	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	100.0	L4	6	L4-6-2	5	KSGNTA	BBEABB
E	heavy	Bos.taurus	Bo_IGHV1-14*01	97.3	Bo_IGHV1-14*01	76.9	H1	13	H1-13-1	12	TVSGLSLSDHNVG	BBBLBBAAABBBB
E	heavy	Bos.taurus	Bo_IGHV1-14*01	97.3	Bo_IGHV1-14*01	44.4	H2	9	H2-9-1	13	VIYKEGDKD	BBBAALBBB
E	heavy	Bos.taurus	Bo_IGHV1-14*01	97.3	Bo_IGHV1-14*01	50.0	H3	27	H3-27-*	-1	ATlgcyfvegvgydcTYGLQHTTFHDA
E	heavy	Bos.taurus	Bo_IGHV1-14*01	97.3	Bo_IGHV1-14*01	100.0	H4	8	H4-8-1	5	KDNSKSQV	BBAAALBB
F	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	69.2	L1	13	L1-13-1	11	SGSSDNIGIFAVG	BBBAAAAAABBBB
F	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	62.5	L2	8	L2-8-1	10	YGNTKRPS	BLEABBBB
F	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	0.0	L3	11	L3-11-*	-1	VCGESKSATPV	BBBBAABABBB
F	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	100.0	L4	6	L4-6-2	5	KSGNTA	BBEABB
G	heavy	Bos.taurus	Bo_IGHV1-14*01	97.3	Bo_IGHV1-14*01	76.9	H1	13	H1-13-1	13	TVSGLSLSDHNVG	BBBLBBAAABBBB
G	heavy	Bos.taurus	Bo_IGHV1-14*01	97.3	Bo_IGHV1-14*01	44.4	H2	9	H2-9-1	12	VIYKEGDKD	BBBAALBBB
G	heavy	Bos.taurus	Bo_IGHV1-14*01	97.3	Bo_IGHV1-14*01	50.0	H3	27	H3-27-*	-1	ATlgcyfvegvgydcTYGLQHTTFHDA
G	heavy	Bos.taurus	Bo_IGHV1-14*01	97.3	Bo_IGHV1-14*01	100.0	H4	8	H4-8-1	6	KDNSKSQV	BBAAALBB
H	heavy	Bos.taurus	Bo_IGHV1-14*01	97.3	Bo_IGHV1-14*01	76.9	H1	13	H1-13-1	12	TVSGLSLSDHNVG	BBBLBBAAABBBB
H	heavy	Bos.taurus	Bo_IGHV1-14*01	97.3	Bo_IGHV1-14*01	44.4	H2	9	H2-9-1	13	VIYKEGDKD	BBBAALBBB
H	heavy	Bos.taurus	Bo_IGHV1-14*01	97.3	Bo_IGHV1-14*01	50.0	H3	27	H3-27-*	-1	ATlgcyfvegvgydcTYGLQHTTFHDA
H	heavy	Bos.taurus	Bo_IGHV1-14*01	97.3	Bo_IGHV1-14*01	100.0	H4	8	H4-8-1	4	KDNSKSQV	BBAAALBB
I	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	69.2	L1	13	L1-13-1	11	SGSSDNIGIFAVG	BBBAAAAAABBBB
I	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	62.5	L2	8	L2-8-1	10	YGNTKRPS	BLLABBBB
I	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	0.0	L3	11	L3-11-*	-1	VCGESKSATPV	BBBBAABABBB
I	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	100.0	L4	6	L4-6-2	5	KSGNTA	BBEABB
J	heavy	Bos.taurus	Bo_IGHV1-14*01	97.3	Bo_IGHV1-14*01	76.9	H1	13	H1-13-1	11	TVSGLSLSDHNVG	BBBLBBAAABBBB
J	heavy	Bos.taurus	Bo_IGHV1-14*01	97.3	Bo_IGHV1-14*01	44.4	H2	9	H2-9-1	12	VIYKEGDKD	BBBAALBBB
J	heavy	Bos.taurus	Bo_IGHV1-14*01	97.3	Bo_IGHV1-14*01	50.0	H3	27	H3-27-*	-1	ATlgcyfvegvgydcTYGLQHTTFHDA
J	heavy	Bos.taurus	Bo_IGHV1-14*01	97.3	Bo_IGHV1-14*01	100.0	H4	8	H4-8-1	5	KDNSKSQV	BBAAALBB
K	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	69.2	L1	13	L1-13-1	11	SGSSDNIGIFAVG	BBBAAAAAABBBB
K	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	62.5	L2	8	L2-8-1	10	YGNTKRPS	BLEABBBB
K	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	0.0	L3	11	L3-11-*	-1	VCGESKSATPV	BBBBAABABBB
K	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	100.0	L4	6	L4-6-2	6	KSGNTA	BBEABB
L	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	69.2	L1	13	L1-13-1	11	SGSSDNIGIFAVG	BBBAAAAAABBBB
L	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	62.5	L2	8	L2-8-1	9	YGNTKRPS	BLEABBBB
L	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	0.0	L3	11	L3-11-*	-1	VCGESKSATPV	BBBBAABABBB
L	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	100.0	L4	6	L4-6-2	5	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022