PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6QN7

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Bos.taurus	Bo_IGHV1-17*01	89.0	Bo_IGHV1-17*01	92.3	H1	13	H1-13-1	7	TVSGFSLSSYSVS	BBBLBBAAABBBB
A	heavy	Bos.taurus	Bo_IGHV1-17*01	89.0	Bo_IGHV1-17*01	44.4	H2	9	H2-9-1	17	DASNGGIIY	BBBAALBBB
A	heavy	Bos.taurus	Bo_IGHV1-17*01	89.0	Bo_IGHV1-17*01	100.0	H3	23	H3-23-*	-1	AKCSvgdsgsyacTGRKGEYVDA
A	heavy	Bos.taurus	Bo_IGHV1-17*01	89.0	Bo_IGHV1-17*01	87.5	H4	8	H4-8-1	9	RDNSKSQV	BBAAALBB
B	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	69.2	L1	13	L1-13-1	13	SGSSDNIGIFAVG	BBBAAAAAABBBB
B	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	62.5	L2	8	L2-8-1	8	YGNTKRPS	BLEABBBB
B	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	0.0	L3	11	L3-11-*	-1	VCGESKSATPV	BBBBAABABBB
B	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	100.0	L4	6	L4-6-2	8	KSGNTA	BBEABB
H	heavy	Bos.taurus	Bo_IGHV1-17*01	89.0	Bo_IGHV1-17*01	92.3	H1	13	H1-13-1	7	TVSGFSLSSYSVS	BBBLBBAAABBBB
H	heavy	Bos.taurus	Bo_IGHV1-17*01	89.0	Bo_IGHV1-17*01	44.4	H2	9	H2-9-1	17	DASNGGIIY	BBBAALBBB
H	heavy	Bos.taurus	Bo_IGHV1-17*01	89.0	Bo_IGHV1-17*01	100.0	H3	23	H3-23-*	-1	AKCSvgdsgsyacTGRKGEYVDA
H	heavy	Bos.taurus	Bo_IGHV1-17*01	89.0	Bo_IGHV1-17*01	87.5	H4	8	H4-8-1	10	RDNSKSQV	BBAAALBB
L	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	69.2	L1	13	L1-13-1	13	SGSSDNIGIFAVG	BBBAAAAAABBBB
L	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	62.5	L2	8	L2-8-1	8	YGNTKRPS	BLEABBBB
L	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	0.0	L3	11	L3-11-*	-1	VCGESKSATPV	BBBBAABABBB
L	lambda	Bos.taurus	Bo_IGLV1-67*04	95.1	Bo_IGLV1-67*04	100.0	L4	6	L4-6-2	8	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022