PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6QFA

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
K	heavy	Helicobacter.pylori	La_IGHV1S1*01_VHH	91.4	La_IGHV1S1*01_VHH	53.8	H1	13	H1-13-5	16	AASGHTFNYPIMG	BBBEBAAABABBB
K	heavy	Helicobacter.pylori	La_IGHV1S1*01_VHH	91.4	La_IGHV1S1*01_VHH	60.0	H2	10	H2-10-6	24	AISWSGGSTS	BBBABELBBB
K	heavy	Helicobacter.pylori	La_IGHV1S1*01_VHH	91.4	La_IGHV1S1*01_VHH	100.0	H3	18	H3-18-*	-1	AAKGRYSgglyYPTNYDY
K	heavy	Helicobacter.pylori	La_IGHV1S1*01_VHH	91.4	La_IGHV1S1*01_VHH	100.0	H4	8	H4-8-1	16	RDNAKNTV	BBAAALBB
L	heavy	Helicobacter.pylori	La_IGHV1S1*01_VHH	91.4	La_IGHV1S1*01_VHH	53.8	H1	13	H1-13-5	16	AASGHTFNYPIMG	BBBEBAAABABBB
L	heavy	Helicobacter.pylori	La_IGHV1S1*01_VHH	91.4	La_IGHV1S1*01_VHH	60.0	H2	10	H2-10-6	24	AISWSGGSTS	BBBABELBBB
L	heavy	Helicobacter.pylori	La_IGHV1S1*01_VHH	91.4	La_IGHV1S1*01_VHH	100.0	H3	18	H3-18-*	-1	AAKGRYSgglyYPTNYDY
L	heavy	Helicobacter.pylori	La_IGHV1S1*01_VHH	91.4	La_IGHV1S1*01_VHH	100.0	H4	8	H4-8-1	16	RDNAKNTV	BBAAALBB
M	heavy	Helicobacter.pylori	La_IGHV1S1*01_VHH	91.4	La_IGHV1S1*01_VHH	53.8	H1	13	H1-13-5	16	AASGHTFNYPIMG	BBBEBAAABABBB
M	heavy	Helicobacter.pylori	La_IGHV1S1*01_VHH	91.4	La_IGHV1S1*01_VHH	60.0	H2	10	H2-10-6	24	AISWSGGSTS	BBBABELBBB
M	heavy	Helicobacter.pylori	La_IGHV1S1*01_VHH	91.4	La_IGHV1S1*01_VHH	100.0	H3	18	H3-18-*	-1	AAKGRYSgglyYPTNYDY
M	heavy	Helicobacter.pylori	La_IGHV1S1*01_VHH	91.4	La_IGHV1S1*01_VHH	100.0	H4	8	H4-8-1	16	RDNAKNTV	BBAAALBB
N	heavy	Helicobacter.pylori	La_IGHV1S1*01_VHH	91.4	La_IGHV1S1*01_VHH	53.8	H1	13	H1-13-5	16	AASGHTFNYPIMG	BBBEBAAABABBB
N	heavy	Helicobacter.pylori	La_IGHV1S1*01_VHH	91.4	La_IGHV1S1*01_VHH	60.0	H2	10	H2-10-6	24	AISWSGGSTS	BBBABELBBB
N	heavy	Helicobacter.pylori	La_IGHV1S1*01_VHH	91.4	La_IGHV1S1*01_VHH	100.0	H3	18	H3-18-*	-1	AAKGRYSgglyYPTNYDY
N	heavy	Helicobacter.pylori	La_IGHV1S1*01_VHH	91.4	La_IGHV1S1*01_VHH	100.0	H4	8	H4-8-1	16	RDNAKNTV	BBAAALBB
O	heavy	Helicobacter.pylori	La_IGHV1S1*01_VHH	91.4	La_IGHV1S1*01_VHH	53.8	H1	13	H1-13-5	16	AASGHTFNYPIMG	BBBEBAAABABBB
O	heavy	Helicobacter.pylori	La_IGHV1S1*01_VHH	91.4	La_IGHV1S1*01_VHH	60.0	H2	10	H2-10-6	24	AISWSGGSTS	BBBABELBBB
O	heavy	Helicobacter.pylori	La_IGHV1S1*01_VHH	91.4	La_IGHV1S1*01_VHH	100.0	H3	18	H3-18-*	-1	AAKGRYSgglyYPTNYDY
O	heavy	Helicobacter.pylori	La_IGHV1S1*01_VHH	91.4	La_IGHV1S1*01_VHH	100.0	H4	8	H4-8-1	16	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022