PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6QF9

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H1	13	H1-13-1	5	AASGFTFSSYSMN	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H2	10	H2-10-2	10	SISSSSSYIY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H3	12	H3-12-1	15	ARQVGATWAFDI	BBBBAAALBBAB
A	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H4	8	H4-8-1	5	RDNAKNSL	BBAAALBB
A	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L1	13	L1-13-1	7	SGSSSNIGSNTVN	BBBAAAAAABBBB
A	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L2	8	L2-8-1	8	YSNNQRPS	BLLABBBB
A	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	88.9	L3	11	L3-11-1	6	AAWDDSLNAWV	BBBBAAALBBB
A	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L4	6	L4-6-2	11	KSGTSA	BBEABB
B	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H1	13	H1-13-1	7	AASGFTFSSYSMN	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H2	10	H2-10-2	9	SISSSSSYIY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H3	12	H3-12-*	-1	ARQVGATWAFDI	BBBBBEALBBAB
B	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H4	8	H4-8-1	4	RDNAKNSL	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L1	13	L1-13-1	8	SGSSSNIGSNTVN	BBBAAAAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L2	8	L2-8-1	10	YSNNQRPS	BLLABBBB
B	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	88.9	L3	11	L3-11-1	5	AAWDDSLNAWV	BBBBAAALBBB
B	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L4	6	L4-6-2	12	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022