PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6QF6

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H1	13	H1-13-1	19	AASGFTFSSYSMN	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H2	10	H2-10-2	13	SISSSSSYIY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H3	12	H3-12-1	17	ARQVGATWAFDI	BBBBAAALBBAB
A	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H4	8	H4-8-1	17	RDNAKNSL	BBAAALBB
A	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L1	13	L1-13-1	16	SGSSSNIGSNTVN	BBBAAAAAABBBB
A	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L2	8	L2-8-1	15	YSNNQRPS	BLLABBBB
A	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	88.9	L3	11	L3-11-1	7	AAWDDSLNAWV	BBBBAAALBBB
A	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L4	6	L4-6-2	18	KSGTSA	BBEABB
B	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H1	13	H1-13-1	11	AASGFTFSSYSMN	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H2	10	H2-10-2	16	SISSSSSYIY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H3	12	H3-12-1	16	ARQVGATWAFDI	BBBBAAALBBAB
B	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H4	8	H4-8-1	18	RDNAKNSL	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L1	13	L1-13-1	19	SGSSSNIGSNTVN	BBBAAAAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L2	8	L2-8-1	14	YSNNQRPS	BLLABBBB
B	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	88.9	L3	11	L3-11-1	11	AAWDDSLNAWV	BBBBAAALBBB
B	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L4	6	L4-6-2	22	KSGTSA	BBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H1	13	H1-13-1	18	AASGFTFSSYSMN	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H2	10	H2-10-2	14	SISSSSSYIY	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H3	12	H3-12-1	19	ARQVGATWAFDI	BBBBAAALBBAB
C	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H4	8	H4-8-1	12	RDNAKNSL	BBAAALBB
C	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L1	13	L1-13-1	15	SGSSSNIGSNTVN	BBBAAAAAABBBB
C	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L2	8	L2-8-1	11	YSNNQRPS	BLEABBBB
C	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	88.9	L3	11	L3-11-1	14	AAWDDSLNAWV	BBBBAAALBBB
C	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L4	6	L4-6-2	14	KSGTSA	BBEABB
D	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H1	13	H1-13-1	16	AASGFTFSSYSMN	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H2	10	H2-10-2	14	SISSSSSYIY	BBBAALABBB
D	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H3	12	H3-12-1	18	ARQVGATWAFDI	BBBBAAALBBAB
D	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H4	8	H4-8-1	9	RDNAKNSL	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L1	13	L1-13-1	13	SGSSSNIGSNTVN	BBBAAAAAABBBB
D	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L2	8	L2-8-1	18	YSNNQRPS	BLLABBBB
D	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	88.9	L3	11	L3-11-1	11	AAWDDSLNAWV	BBBBAAALBBB
D	lambda	Homo.sapiens	Hu_IGLV1-44*01	100.0	Hu_IGLV1-44*01	100.0	L4	6	L4-6-2	19	KSGTSA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022