PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6Q23

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
E	heavy	Homo.sapiens	Hu_IGHV3-20*04	83.6	Hu_IGHV3-20*04	84.6	H1	13	H1-13-1	9	AASGFKFDDYAMS	BBBLBBAAABBBB
E	heavy	Homo.sapiens	Hu_IGHV3-20*04	83.6	Hu_IGHV3-20*04	60.0	H2	10	H2-10-2	18	GLNWNGDITA	BBBAALABBB
E	heavy	Homo.sapiens	Hu_IGHV3-20*04	83.6	Hu_IGHV3-20*04	100.0	H3	23	H3-23-*	-1	ARTSSWGDytrgpepkiTWYFDL
E	heavy	Homo.sapiens	Hu_IGHV3-20*04	83.6	Hu_IGHV3-20*04	100.0	H4	8	H4-8-1	4	RDNAKNSL	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV1-9*01	94.2	Hu_IGKV1-9*01	81.8	L1	11	L1-11-1	10	RASQGIDGYLA	BBABBAEABBB
F	kappa	Homo.sapiens	Hu_IGKV1-9*01	94.2	Hu_IGKV1-9*01	87.5	L2	8	L2-8-*	-1	YAASLLQS	BLLABBBA
F	kappa	Homo.sapiens	Hu_IGKV1-9*01	94.2	Hu_IGKV1-9*01	71.4	L3	10	L3-10-*	-1	QHLDSypLFT	BBABABaBBB
F	kappa	Homo.sapiens	Hu_IGKV1-9*01	94.2	Hu_IGKV1-9*01	83.3	L4	6	L4-6-1	17	GYGTEF	EBEABB
G	heavy	Homo.sapiens	Hu_IGHV3-20*04	83.6	Hu_IGHV3-20*04	84.6	H1	13	H1-13-1	10	AASGFKFDDYAMS	BBBLBBAAABBBB
G	heavy	Homo.sapiens	Hu_IGHV3-20*04	83.6	Hu_IGHV3-20*04	60.0	H2	10	H2-10-2	17	GLNWNGDITA	BBBAALABBB
G	heavy	Homo.sapiens	Hu_IGHV3-20*04	83.6	Hu_IGHV3-20*04	100.0	H3	23	H3-23-*	-1	ARTSSWGDytrgpepkiTWYFDL
G	heavy	Homo.sapiens	Hu_IGHV3-20*04	83.6	Hu_IGHV3-20*04	100.0	H4	8	H4-8-1	4	RDNAKNSL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-20*04	83.6	Hu_IGHV3-20*04	84.6	H1	13	H1-13-1	9	AASGFKFDDYAMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-20*04	83.6	Hu_IGHV3-20*04	60.0	H2	10	H2-10-2	17	GLNWNGDITA	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-20*04	83.6	Hu_IGHV3-20*04	100.0	H3	23	H3-23-*	-1	ARTSSWGDytrgpepkiTWYFDL
H	heavy	Homo.sapiens	Hu_IGHV3-20*04	83.6	Hu_IGHV3-20*04	100.0	H4	8	H4-8-1	4	RDNAKNSL	BBAAALBB
I	kappa	Homo.sapiens	Hu_IGKV1-9*01	94.2	Hu_IGKV1-9*01	81.8	L1	11	L1-11-1	9	RASQGIDGYLA	BBABBAEABBB
I	kappa	Homo.sapiens	Hu_IGKV1-9*01	94.2	Hu_IGKV1-9*01	87.5	L2	8	L2-8-*	-1	YAASLLQS	BLLABBBA
I	kappa	Homo.sapiens	Hu_IGKV1-9*01	94.2	Hu_IGKV1-9*01	71.4	L3	10	L3-10-*	-1	QHLDSypLFT	BBABABaBBB
I	kappa	Homo.sapiens	Hu_IGKV1-9*01	94.2	Hu_IGKV1-9*01	83.3	L4	6	L4-6-1	18	GYGTEF	EBEABB
J	heavy	Homo.sapiens	Hu_IGHV3-20*04	83.6	Hu_IGHV3-20*04	84.6	H1	13	H1-13-1	10	AASGFKFDDYAMS	BBBLBBAAABBBB
J	heavy	Homo.sapiens	Hu_IGHV3-20*04	83.6	Hu_IGHV3-20*04	60.0	H2	10	H2-10-2	18	GLNWNGDITA	BBBAALABBB
J	heavy	Homo.sapiens	Hu_IGHV3-20*04	83.6	Hu_IGHV3-20*04	100.0	H3	23	H3-23-*	-1	ARTSSWGDytrgpepkiTWYFDL
J	heavy	Homo.sapiens	Hu_IGHV3-20*04	83.6	Hu_IGHV3-20*04	100.0	H4	8	H4-8-1	4	RDNAKNSL	BBAAALBB
K	kappa	Homo.sapiens	Hu_IGKV1-9*01	94.2	Hu_IGKV1-9*01	81.8	L1	11	L1-11-1	9	RASQGIDGYLA	BBABBAEABBB
K	kappa	Homo.sapiens	Hu_IGKV1-9*01	94.2	Hu_IGKV1-9*01	87.5	L2	8	L2-8-*	-1	YAASLLQS	BLLABBBA
K	kappa	Homo.sapiens	Hu_IGKV1-9*01	94.2	Hu_IGKV1-9*01	71.4	L3	10	L3-10-*	-1	QHLDSypLFT	BBABABaBBB
K	kappa	Homo.sapiens	Hu_IGKV1-9*01	94.2	Hu_IGKV1-9*01	83.3	L4	6	L4-6-1	17	GYGTEF	EBEABB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	94.2	Hu_IGKV1-9*01	81.8	L1	11	L1-11-1	9	RASQGIDGYLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	94.2	Hu_IGKV1-9*01	87.5	L2	8	L2-8-*	-1	YAASLLQS	BLLABBBA
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	94.2	Hu_IGKV1-9*01	71.4	L3	10	L3-10-*	-1	QHLDSypLFT	BBABABaBBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	94.2	Hu_IGKV1-9*01	83.3	L4	6	L4-6-1	17	GYGTEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022