PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6Q1Z

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV1-9*01	81.8	L1	11	L1-11-1	9	RASQDISSFLA	BBABBAEABBB
C	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV1-9*01	87.5	L2	8	L2-8-1	8	YAASLLQS	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV1-9*01	100.0	L3	10	L3-10-cis78-*	-1	QQLNSypLFT	BBABABaBBB
C	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV1-9*01	83.3	L4	6	L4-6-2	22	GSGTDF	BBEABB
D	heavy	Homo.sapiens	Hu_IGHV3-20*04	90.4	Hu_IGHV3-20*04	100.0	H1	13	H1-13-1	11	AASGFTFDDYGMS	BBBLBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV3-20*04	90.4	Hu_IGHV3-20*04	60.0	H2	10	H2-10-2	18	GLNWNGDITA	BBBAALABBB
D	heavy	Homo.sapiens	Hu_IGHV3-20*04	90.4	Hu_IGHV3-20*04	100.0	H3	23	H3-23-*	-1	ARVRTWGeyttreepiHSWYFDL
D	heavy	Homo.sapiens	Hu_IGHV3-20*04	90.4	Hu_IGHV3-20*04	87.5	H4	8	H4-8-1	6	RDNAKSSL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-20*04	90.4	Hu_IGHV3-20*04	100.0	H1	13	H1-13-1	11	AASGFTFDDYGMS	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-20*04	90.4	Hu_IGHV3-20*04	60.0	H2	10	H2-10-2	18	GLNWNGDITA	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-20*04	90.4	Hu_IGHV3-20*04	100.0	H3	23	H3-23-*	-1	ARVRTWGeyttreepiHSWYFDL
H	heavy	Homo.sapiens	Hu_IGHV3-20*04	90.4	Hu_IGHV3-20*04	87.5	H4	8	H4-8-1	6	RDNAKSSL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV1-9*01	81.8	L1	11	L1-11-1	9	RASQDISSFLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV1-9*01	87.5	L2	8	L2-8-1	8	YAASLLQS	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV1-9*01	100.0	L3	10	L3-10-cis78-*	-1	QQLNSypLFT	BBABABaBBB
L	kappa	Homo.sapiens	Hu_IGKV1-9*01	95.7	Hu_IGKV1-9*01	83.3	L4	6	L4-6-2	22	GSGTDF	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022