PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6Q0O

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	lambda	Homo.sapiens	Hu_IGLV3-19*01	97.0	Hu_IGLV3-19*01	90.9	L1	11	L1-11-4	16	QGDSLRGYYAS	BEAAAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-19*01	97.0	Hu_IGLV3-19*01	100.0	L2	8	L2-8-*	-1	YGKNNRPS	AELLBBBB
B	lambda	Homo.sapiens	Hu_IGLV3-19*01	97.0	Hu_IGLV3-19*01	88.9	L3	12	L3-12-*	-1	ASRDSSGNHpVV
B	lambda	Homo.sapiens	Hu_IGLV3-19*01	97.0	Hu_IGLV3-19*01	83.3	L4	6	L4-6-2	13	RSGNTA	BBEABB
Z	heavy	Homo.sapiens	Hu_IGHV4-4*02	95.9	Hu_IGHV4-4*02	92.9	H1	14	H1-14-*	-1	AVSGGSISsSQWWS	BBBLBBAABABBBB
Z	heavy	Homo.sapiens	Hu_IGHV4-4*02	95.9	Hu_IGHV4-4*02	55.6	H2	9	H2-9-*	-1	EISHGVYTN	BBBEAABBB
Z	heavy	Homo.sapiens	Hu_IGHV4-4*02	95.9	Hu_IGHV4-4*02	100.0	H3	23	H3-23-*	-1	ARAPPYcssascpddYYYFFLDV
Z	heavy	Homo.sapiens	Hu_IGHV4-4*02	95.9	Hu_IGHV4-4*02	75.0	H4	8	H4-8-1	8	ADKSQNQF	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022