PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6PZH

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	100.0	L1	14	L1-14-2	6	TGTSSDVGgYNYVS	BBBAABAAABABBB
A	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	87.5	L2	8	L2-8-1	10	YDVSNRPS	BLLABBBB
A	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	77.8	L3	10	L3-10-1	15	SSYTSSTTNV	BBBBAALBBB
A	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	8	KSGNTA	BBEABB
B	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	84.6	H1	13	H1-13-1	8	AASGFTFNNYGMH	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H2	10	H2-10-2	6	VISYDGSNKY	BBBAALABBB
B	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H3	17	H3-17-*	-1	AKDKRFITmilVGPFDY
B	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	84.6	H1	13	H1-13-1	9	AASGFTFNNYGMH	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H2	10	H2-10-2	6	VISYDGSNKY	BBBAALABBB
H	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H3	17	H3-17-*	-1	AKDKRFITmilVGPFDY
H	heavy	Homo.sapiens	Hu_IGHV3-30*18	100.0	Hu_IGHV3-30*18	100.0	H4	8	H4-8-1	8	RDNSKNTL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	100.0	L1	14	L1-14-2	6	TGTSSDVGgYNYVS	BBBAABAAABAABB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	87.5	L2	8	L2-8-1	10	YDVSNRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	77.8	L3	10	L3-10-1	15	SSYTSSTTNV	BBBBAALBBB
L	lambda	Homo.sapiens	Hu_IGLV2-14*01	95.6	Hu_IGLV2-14*01	100.0	L4	6	L4-6-2	8	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022