PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6PXR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV5-6*03	95.9	Mo_IGHV5-6*03	84.6	H1	13	H1-13-1	11	AASGFSFSKYGMS	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV5-6*03	95.9	Mo_IGHV5-6*03	80.0	H2	10	H2-10-2	6	TISSSGSRTY	BBBAALABBB
H	heavy	Mus.musculus	Mo_IGHV5-6*03	95.9	Mo_IGHV5-6*03	0.0	H3	10	H3-10-*	-1	SISWDGAMDY	BBBAABABAB
H	heavy	Mus.musculus	Mo_IGHV5-6*03	95.9	Mo_IGHV5-6*03	100.0	H4	8	H4-8-1	5	RDNAKNTL	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	93.8	L1	16	L1-16-1	6	KSSQSIvhsngNTYLE	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	6	YKVSNRFS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	85.7	L3	9	L3-9-cis7-1	11	FQGSLVPWA	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022