PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6PV8

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
F	heavy	Mus.musculus	Mo_IGHV1S137*01	94.5	Mo_IGHV1S137*01	84.6	H1	13	H1-13-4	18	KGSGYTFTDYALY	BBBLBBABLBBBB
F	heavy	Mus.musculus	Mo_IGHV1S137*01	94.5	Mo_IGHV1S137*01	40.0	H2	10	H2-10-1	13	VINPYSGNTN	BBBAAALBBB
F	heavy	Mus.musculus	Mo_IGHV1S137*01	94.5	Mo_IGHV1S137*01	50.0	H3	13	H3-13-*	-1	ASGYDGYPYTMDY	BBBBABAALBBAB
F	heavy	Mus.musculus	Mo_IGHV1S137*01	94.5	Mo_IGHV1S137*01	100.0	H4	8	H4-8-1	17	VDKSSSTA	BBAAALBB
G	kappa	Mus.musculus	Mo_IGKV4-59*01	97.1	Mo_IGKV4-59*01	80.0	L1	10	L1-10-1	20	SASSSMTYMH	BBABBBABBB
G	kappa	Mus.musculus	Mo_IGKV4-59*01	97.1	Mo_IGKV4-59*01	87.5	L2	8	L2-8-*	-1	YDTSQLAS	BLLABBBA
G	kappa	Mus.musculus	Mo_IGKV4-59*01	97.1	Mo_IGKV4-59*01	87.5	L3	9	L3-9-cis7-1	18	QQWSSNPLT	BBAABBbBB
G	kappa	Mus.musculus	Mo_IGKV4-59*01	97.1	Mo_IGKV4-59*01	83.3	L4	6	L4-6-1	14	GSGTSF	EBEABB
H	heavy	Mus.musculus	Mo_IGHV1S137*01	94.5	Mo_IGHV1S137*01	84.6	H1	13	H1-13-4	10	KGSGYTFTDYALY	BBBLBBABLBBBB
H	heavy	Mus.musculus	Mo_IGHV1S137*01	94.5	Mo_IGHV1S137*01	40.0	H2	10	H2-10-1	17	VINPYSGNTN	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S137*01	94.5	Mo_IGHV1S137*01	50.0	H3	13	H3-13-*	-1	ASGYDGYPYTMDY	BBBBABAALBBAB
H	heavy	Mus.musculus	Mo_IGHV1S137*01	94.5	Mo_IGHV1S137*01	100.0	H4	8	H4-8-1	13	VDKSSSTA	BBAAALBB
I	kappa	Mus.musculus	Mo_IGKV4-59*01	97.1	Mo_IGKV4-59*01	80.0	L1	10	L1-10-1	22	SASSSMTYMH	BBABBBABBB
I	kappa	Mus.musculus	Mo_IGKV4-59*01	97.1	Mo_IGKV4-59*01	87.5	L2	8	L2-8-*	-1	YDTSQLAS	BLLABBBA
I	kappa	Mus.musculus	Mo_IGKV4-59*01	97.1	Mo_IGKV4-59*01	87.5	L3	9	L3-9-cis7-1	16	QQWSSNPLT	BBAABBbBB
I	kappa	Mus.musculus	Mo_IGKV4-59*01	97.1	Mo_IGKV4-59*01	83.3	L4	6	L4-6-1	14	GSGTSF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022