PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6PHF

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV1-8*03	94.5	Hu_IGHV1-8*03	76.9	H1	13	H1-13-1	12	KASGYSFTSYILN	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV1-8*03	94.5	Hu_IGHV1-8*03	70.0	H2	10	H2-10-1	11	WMNPDSNNTE	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV1-8*03	94.5	Hu_IGHV1-8*03	100.0	H3	13	H3-13-*	-1	ARHSFKSNTGFDY	BBBBAAALAEBAB
A	heavy	Homo.sapiens	Hu_IGHV1-8*03	94.5	Hu_IGHV1-8*03	75.0	H4	8	H4-8-1	15	RDTSISTV	BBAAALBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	94.0	Hu_IGLV3-1*01	72.7	L1	11	L1-11-4	21	SGDKLGGKYGY	BBABAAABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	94.0	Hu_IGLV3-1*01	100.0	L2	8	L2-8-1	14	YQDSKRPS	BLEABBBB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	94.0	Hu_IGLV3-1*01	75.0	L3	10	L3-10-*	-1	QAWDISTNWV	BBBBAABABB
B	lambda	Homo.sapiens	Hu_IGLV3-1*01	94.0	Hu_IGLV3-1*01	100.0	L4	6	L4-6-2	14	NSGNTA	BBEABB
C	heavy	Homo.sapiens	Hu_IGHV1-8*03	94.5	Hu_IGHV1-8*03	76.9	H1	13	H1-13-1	12	KASGYSFTSYILN	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV1-8*03	94.5	Hu_IGHV1-8*03	70.0	H2	10	H2-10-1	11	WMNPDSNNTE	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV1-8*03	94.5	Hu_IGHV1-8*03	100.0	H3	13	H3-13-*	-1	ARHSFKSNTGFDY	BBBBAAALAEBAB
C	heavy	Homo.sapiens	Hu_IGHV1-8*03	94.5	Hu_IGHV1-8*03	75.0	H4	8	H4-8-1	15	RDTSISTV	BBAAALBB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	94.0	Hu_IGLV3-1*01	72.7	L1	11	L1-11-4	21	SGDKLGGKYGY	BBABAAABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	94.0	Hu_IGLV3-1*01	100.0	L2	8	L2-8-1	13	YQDSKRPS	BLEABBBB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	94.0	Hu_IGLV3-1*01	75.0	L3	10	L3-10-*	-1	QAWDISTNWV	BBBBAABABB
D	lambda	Homo.sapiens	Hu_IGLV3-1*01	94.0	Hu_IGLV3-1*01	100.0	L4	6	L4-6-2	14	NSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022