PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6PHC

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-48*01	97.3	Hu_IGHV3-48*01	76.9	H1	13	H1-13-1	8	VASGFTFSNYNMN	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-48*01	97.3	Hu_IGHV3-48*01	90.0	H2	10	H2-10-2	8	YISSSSGTIY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-48*01	97.3	Hu_IGHV3-48*01	50.0	H3	18	H3-18-*	-1	VRVEYYYgssgYYYDFDS
A	heavy	Homo.sapiens	Hu_IGHV3-48*01	97.3	Hu_IGHV3-48*01	87.5	H4	8	H4-8-1	12	RDNAKNSM	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	CDRLenMismatch	-1.0	L1	15	L1-15-1	9	RSSQSLlhngYNYLD	BBABBABBLLBBBBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L2	8	L2-8-1	8	YLGSNRAS	BLEABBBB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	57.1	L3	8	L3-8-*	-1	MQTLQPFT	BBAABBbB
B	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	4	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-48*01	97.3	Hu_IGHV3-48*01	76.9	H1	13	H1-13-1	8	VASGFTFSNYNMN	BBBLBBAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV3-48*01	97.3	Hu_IGHV3-48*01	90.0	H2	10	H2-10-2	8	YISSSSGTIY	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-48*01	97.3	Hu_IGHV3-48*01	50.0	H3	18	H3-18-*	-1	VRVEYYYgssgYYYDFDS
C	heavy	Homo.sapiens	Hu_IGHV3-48*01	97.3	Hu_IGHV3-48*01	87.5	H4	8	H4-8-1	12	RDNAKNSM	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	CDRLenMismatch	-1.0	L1	15	L1-15-1	8	RSSQSLlhngYNYLD	BBABBABBLLBBBBB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L2	8	L2-8-*	-1	YLGSNRAS	BLEABBBA
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	57.1	L3	8	L3-8-*	-1	MQTLQPFT	BBAABBbB
D	kappa	Homo.sapiens	Hu_IGKV2-28*01	100.0	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	3	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022