PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6PHB

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	90.9	L1	11	L1-11-1	10	QASQDISNFLN	BBABBAEABBB
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	4	YDASNLET	BLLABBBB
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	85.7	L3	10	L3-10-1	17	QQYDNLriFT	BBBBAALBBB
A	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
B	heavy	Homo.sapiens	Hu_IGHV4-4*07	93.2	Hu_IGHV4-4*07	84.6	H1	13	H1-13-*	-1	TVSGDSMSSYYWS	BBBEBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV4-4*07	93.2	Hu_IGHV4-4*07	88.9	H2	9	H2-9-1	20	RISTSGSTN	BBBAALBBB
B	heavy	Homo.sapiens	Hu_IGHV4-4*07	93.2	Hu_IGHV4-4*07	50.0	H3	11	H3-11-*	-1	ACSGSYSFFDY	BBBABAABBAB
B	heavy	Homo.sapiens	Hu_IGHV4-4*07	93.2	Hu_IGHV4-4*07	75.0	H4	8	H4-8-1	10	VDTSNNHF	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	90.9	L1	11	L1-11-1	10	QASQDISNFLN	BBABBAEABBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L2	8	L2-8-1	4	YDASNLET	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	85.7	L3	10	L3-10-1	17	QQYDNLriFT	BBBBAALBBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	100.0	Hu_IGKV1-33*01	100.0	L4	6	L4-6-1	10	GSGTDF	EBEABB
D	heavy	Homo.sapiens	Hu_IGHV4-4*07	93.2	Hu_IGHV4-4*07	84.6	H1	13	H1-13-*	-1	TVSGDSMSSYYWS	BBBEBBAAABBBB
D	heavy	Homo.sapiens	Hu_IGHV4-4*07	93.2	Hu_IGHV4-4*07	88.9	H2	9	H2-9-1	20	RISTSGSTN	BBBAALBBB
D	heavy	Homo.sapiens	Hu_IGHV4-4*07	93.2	Hu_IGHV4-4*07	50.0	H3	11	H3-11-*	-1	ACSGSYSFFDY	BBBABAABBAB
D	heavy	Homo.sapiens	Hu_IGHV4-4*07	93.2	Hu_IGHV4-4*07	75.0	H4	8	H4-8-1	10	VDTSNNHF	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022