PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6PE8

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-21*05	95.9	Hu_IGHV3-21*05	84.6	H1	13	H1-13-1	10	AASGFTFSDYGMN	BBBLBBAAABBBB
A	heavy	Homo.sapiens	Hu_IGHV3-21*05	95.9	Hu_IGHV3-21*05	60.0	H2	10	H2-10-*	-1	YISSGRGNIY	BBBAAALBBB
A	heavy	Homo.sapiens	Hu_IGHV3-21*05	95.9	Hu_IGHV3-21*05	100.0	H3	9	H3-9-*	-1	ARSWGYFDV	BBBBLBBAB
A	heavy	Homo.sapiens	Hu_IGHV3-21*05	95.9	Hu_IGHV3-21*05	100.0	H4	8	H4-8-1	8	RDNAKNSL	BBAAALBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	64.7	L1	17	L1-17-1	8	KSSQSLlnrgnqKNYLT	BBABBABBAAALBBBBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	9	YWASTRES	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	42.9	L3	9	L3-9-cis7-1	15	QNDYTYPLT	BBAABBbBB
B	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV3-21*05	95.9	Hu_IGHV3-21*05	84.6	H1	13	H1-13-1	11	AASGFTFSDYGMN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-21*05	95.9	Hu_IGHV3-21*05	60.0	H2	10	H2-10-3	22	YISSGRGNIY	BBBBEALBBB
H	heavy	Homo.sapiens	Hu_IGHV3-21*05	95.9	Hu_IGHV3-21*05	100.0	H3	9	H3-9-*	-1	ARSWGYFDV	BBBALBBAB
H	heavy	Homo.sapiens	Hu_IGHV3-21*05	95.9	Hu_IGHV3-21*05	100.0	H4	8	H4-8-1	8	RDNAKNSL	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	64.7	L1	17	L1-17-1	11	KSSQSLlnrgnqKNYLT	BBABBABBAAALBBBBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	100.0	L2	8	L2-8-1	11	YWASTRES	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	42.9	L3	9	L3-9-cis7-1	13	QNDYTYPLT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV4-1*01	98.6	Hu_IGKV4-1*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022