PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6PDR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1-39*01	97.2	Mo_IGHV1-39*01	76.9	H1	13	H1-13-*	-1	KASGDSFTDYNLS	BBBEAABABBBBB
H	heavy	Mus.musculus	Mo_IGHV1-39*01	97.2	Mo_IGHV1-39*01	90.0	H2	10	H2-10-1	8	VINPNYGTTT	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1-39*01	97.2	Mo_IGHV1-39*01	50.0	H3	9	H3-9-*	-1	AFSSRLFGY	BBBBAABBB
H	heavy	Mus.musculus	Mo_IGHV1-39*01	97.2	Mo_IGHV1-39*01	100.0	H4	8	H4-8-1	13	VDQSSSTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	87.5	L1	16	L1-16-1	6	RSSQSIlhsngNTYLD	BBABBABBAALBBBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L2	8	L2-8-1	9	YKVSNRFS	BLEABBBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L3	9	L3-9-cis7-1	9	FQGSHVPLT	BBAABBbBB
L	kappa	Mus.musculus	Mo_IGKV1-117*01	97.1	Mo_IGKV1-117*01	100.0	L4	6	L4-6-1	7	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022