PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6P9H

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	89.0	Hu_IGHV1-69*01	46.2	H1	13	H1-13-*	-1	KDSGDSFRRYVIN	BBBBAAAAABBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	89.0	Hu_IGHV1-69*01	70.0	H2	10	H2-10-1	17	GIIPIFDKAK	BBBAAALBBB
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	89.0	Hu_IGHV1-69*01	100.0	H3	14	H3-14-*	-1	ARKEDGRRDDVFDI	BBBBBLBABBBBAB
C	heavy	Homo.sapiens	Hu_IGHV1-69*01	89.0	Hu_IGHV1-69*01	87.5	H4	8	H4-8-1	8	ADESTSTS	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV3-15*01	91.3	Hu_IGKV3-15*01	72.7	L1	11	L1-11-1	7	RASHSVGSSLA	BBABBAEABBB
D	kappa	Homo.sapiens	Hu_IGKV3-15*01	91.3	Hu_IGKV3-15*01	87.5	L2	8	L2-8-1	7	YGVSTRAT	BLEABBBB
D	kappa	Homo.sapiens	Hu_IGKV3-15*01	91.3	Hu_IGKV3-15*01	85.7	L3	9	L3-9-cis7-1	9	QQYDNWPFT	BBAABBbBB
D	kappa	Homo.sapiens	Hu_IGKV3-15*01	91.3	Hu_IGKV3-15*01	83.3	L4	6	L4-6-1	21	GSATEF	BBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	89.0	Hu_IGHV1-69*01	46.2	H1	13	H1-13-*	-1	KDSGDSFRRYVIN	BBABAAAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	89.0	Hu_IGHV1-69*01	70.0	H2	10	H2-10-1	19	GIIPIFDKAK	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	89.0	Hu_IGHV1-69*01	100.0	H3	14	H3-14-*	-1	ARKEDGRRDDVFDI	BBBBBLBABBBBAB
H	heavy	Homo.sapiens	Hu_IGHV1-69*01	89.0	Hu_IGHV1-69*01	87.5	H4	8	H4-8-1	7	ADESTSTS	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	91.3	Hu_IGKV3-15*01	72.7	L1	11	L1-11-1	4	RASHSVGSSLA	BBABBAEABBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	91.3	Hu_IGKV3-15*01	87.5	L2	8	L2-8-1	10	YGVSTRAT	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	91.3	Hu_IGKV3-15*01	85.7	L3	9	L3-9-cis7-1	10	QQYDNWPFT	BBAABBbBB
L	kappa	Homo.sapiens	Hu_IGKV3-15*01	91.3	Hu_IGKV3-15*01	83.3	L4	6	L4-6-1	6	GSATEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022