PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6P8N

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Mus.musculus	Mo_IGHV1S26*01	69.9	Mo_IGHV1S26*01	76.9	H1	13	H1-13-1	13	KASGYTFTGYYMN	BBBLBBAAABBBB
B	heavy	Mus.musculus	Mo_IGHV1S26*01	69.9	Mo_IGHV1S26*01	70.0	H2	10	H2-10-1	13	WINPNSGGTN	BBBAAALBBB
B	heavy	Mus.musculus	Mo_IGHV1S26*01	69.9	Mo_IGHV1S26*01	100.0	H3	14	H3-14-*	-1	ARGKNSDYNWDFQH	BAEABAABBLBBAB
B	heavy	Mus.musculus	Mo_IGHV1S26*01	69.9	Mo_IGHV1S26*01	62.5	H4	8	H4-8-1	7	RDTSISTA	BBAAALBB
D	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L1	17	L1-17-*	-1	KSSqsllyssnqKNYLA
D	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L2	8	L2-8-*	-1	YWASTRES	ABEABBBB
D	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	0.0	L3	5	L3-5-1	8	QQYEM	BBEAB
D	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB
H	heavy	Mus.musculus	Mo_IGHV1S26*01	69.9	Mo_IGHV1S26*01	76.9	H1	13	H1-13-1	12	KASGYTFTGYYMN	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S26*01	69.9	Mo_IGHV1S26*01	70.0	H2	10	H2-10-1	15	WINPNSGGTN	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S26*01	69.9	Mo_IGHV1S26*01	100.0	H3	14	H3-14-*	-1	ARGKNSDYNWDFQH	BAEABAABBLBBAB
H	heavy	Mus.musculus	Mo_IGHV1S26*01	69.9	Mo_IGHV1S26*01	62.5	H4	8	H4-8-1	12	RDTSISTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L1	17	L1-17-*	-1	KSSqsllyssnqKNYLA
L	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L2	8	L2-8-*	-1	YWASTRES	ABEABBBB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	0.0	L3	5	L3-5-1	12	QQYEM	BBEAB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L4	6	L4-6-*	-1	GSGTDF	EABABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022