PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6P8M

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Mus.musculus	Mo_IGHV1S12*01	69.9	Mo_IGHV1S12*01	92.3	H1	13	H1-13-1	7	KASGYTFTGYYIH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1S12*01	69.9	Mo_IGHV1S12*01	50.0	H2	10	H2-10-1	10	WINPNRGGTN	BBBAAALBBB
H	heavy	Mus.musculus	Mo_IGHV1S12*01	69.9	Mo_IGHV1S12*01	100.0	H3	14	H3-14-*	-1	ARGINSDYTWDFQH	BBBABAABAABBAB
H	heavy	Mus.musculus	Mo_IGHV1S12*01	69.9	Mo_IGHV1S12*01	75.0	H4	8	H4-8-1	8	RDTSISTA	BBAAALBB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L1	17	L1-17-*	-1	KSSQsllyssnqKNYLA
L	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L2	8	L2-8-*	-1	YWASTRES	BLEBLBBB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	0.0	L3	5	L3-5-1	15	QQYET	BBEAB
L	kappa	Mus.musculus	Mo_IGKV8-30*01	100.0	Mo_IGKV8-30*01	100.0	L4	6	L4-6-1	6	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022