PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6P67

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV1-34*01	97.3	Mo_IGHV1-34*01	92.3	H1	13	H1-13-1	7	KASGYTFSDYYMH	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV1-34*01	97.3	Mo_IGHV1-34*01	90.0	H2	10	H2-10-*	-1	YIYPDNGGNG	BBBAAABEBB
A	heavy	Mus.musculus	Mo_IGHV1-34*01	97.3	Mo_IGHV1-34*01	100.0	H3	13	H3-13-*	-1	ARGTYYDGSYFDY	BBBBAABAABBAB
A	heavy	Mus.musculus	Mo_IGHV1-34*01	97.3	Mo_IGHV1-34*01	87.5	H4	8	H4-8-*	-1	VDKSSSTV	BAAALBBB
B	kappa	Mus.musculus	Mo_IGKV6-17*01	98.6	Mo_IGKV6-17*01	90.9	L1	11	L1-11-1	7	KASQDVSTTVA	BBABBAEABBB
B	kappa	Mus.musculus	Mo_IGKV6-17*01	98.6	Mo_IGKV6-17*01	100.0	L2	8	L2-8-1	3	YSASYRYT	BLLABBBB
B	kappa	Mus.musculus	Mo_IGKV6-17*01	98.6	Mo_IGKV6-17*01	85.7	L3	9	L3-9-cis7-1	16	QQHYSIPRT	BBBABBbBB
B	kappa	Mus.musculus	Mo_IGKV6-17*01	98.6	Mo_IGKV6-17*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
C	heavy	Mus.musculus	Mo_IGHV1-34*01	97.3	Mo_IGHV1-34*01	92.3	H1	13	H1-13-1	7	KASGYTFSDYYMH	BBBLBBAAABBBB
C	heavy	Mus.musculus	Mo_IGHV1-34*01	97.3	Mo_IGHV1-34*01	90.0	H2	10	H2-10-*	-1	YIYPDNGGNG	BBBAAABEBB
C	heavy	Mus.musculus	Mo_IGHV1-34*01	97.3	Mo_IGHV1-34*01	100.0	H3	13	H3-13-*	-1	ARGTYYDGSYFDY	BBBBAALALBBAB
C	heavy	Mus.musculus	Mo_IGHV1-34*01	97.3	Mo_IGHV1-34*01	87.5	H4	8	H4-8-*	-1	VDKSSSTV	BAAALBBB
D	kappa	Mus.musculus	Mo_IGKV6-17*01	98.6	Mo_IGKV6-17*01	90.9	L1	11	L1-11-1	7	KASQDVSTTVA	BBABBAEABBB
D	kappa	Mus.musculus	Mo_IGKV6-17*01	98.6	Mo_IGKV6-17*01	100.0	L2	8	L2-8-1	3	YSASYRYT	BLLABBBB
D	kappa	Mus.musculus	Mo_IGKV6-17*01	98.6	Mo_IGKV6-17*01	85.7	L3	9	L3-9-cis7-1	16	QQHYSIPRT	BBBABBbBB
D	kappa	Mus.musculus	Mo_IGKV6-17*01	98.6	Mo_IGKV6-17*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
E	heavy	Mus.musculus	Mo_IGHV1-34*01	97.3	Mo_IGHV1-34*01	92.3	H1	13	H1-13-1	7	KASGYTFSDYYMH	BBBLBBAAABBBB
E	heavy	Mus.musculus	Mo_IGHV1-34*01	97.3	Mo_IGHV1-34*01	90.0	H2	10	H2-10-*	-1	YIYPDNGGNG	BBBAAABBBB
E	heavy	Mus.musculus	Mo_IGHV1-34*01	97.3	Mo_IGHV1-34*01	100.0	H3	13	H3-13-*	-1	ARGTYYDGSYFDY	BBBBAALALBBAB
E	heavy	Mus.musculus	Mo_IGHV1-34*01	97.3	Mo_IGHV1-34*01	87.5	H4	8	H4-8-*	-1	VDKSSSTV	BAAALBBB
F	kappa	Mus.musculus	Mo_IGKV6-17*01	98.6	Mo_IGKV6-17*01	90.9	L1	11	L1-11-1	7	KASQDVSTTVA	BBABBAEABBB
F	kappa	Mus.musculus	Mo_IGKV6-17*01	98.6	Mo_IGKV6-17*01	100.0	L2	8	L2-8-1	3	YSASYRYT	BLLABBBB
F	kappa	Mus.musculus	Mo_IGKV6-17*01	98.6	Mo_IGKV6-17*01	85.7	L3	9	L3-9-cis7-1	16	QQHYSIPRT	BBBABBbBB
F	kappa	Mus.musculus	Mo_IGKV6-17*01	98.6	Mo_IGKV6-17*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB
H	heavy	Mus.musculus	Mo_IGHV1-34*01	97.3	Mo_IGHV1-34*01	92.3	H1	13	H1-13-1	8	KASGYTFSDYYMH	BBBLBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-34*01	97.3	Mo_IGHV1-34*01	90.0	H2	10	H2-10-*	-1	YIYPDNGGNG	BBBAAABBBB
H	heavy	Mus.musculus	Mo_IGHV1-34*01	97.3	Mo_IGHV1-34*01	100.0	H3	13	H3-13-*	-1	ARGTYYDGSYFDY	BBBBAALALBBAB
H	heavy	Mus.musculus	Mo_IGHV1-34*01	97.3	Mo_IGHV1-34*01	87.5	H4	8	H4-8-*	-1	VDKSSSTV	BAAALBBB
L	kappa	Mus.musculus	Mo_IGKV6-17*01	98.6	Mo_IGKV6-17*01	90.9	L1	11	L1-11-1	7	KASQDVSTTVA	BBABBAEABBB
L	kappa	Mus.musculus	Mo_IGKV6-17*01	98.6	Mo_IGKV6-17*01	100.0	L2	8	L2-8-1	3	YSASYRYT	BLLABBBB
L	kappa	Mus.musculus	Mo_IGKV6-17*01	98.6	Mo_IGKV6-17*01	85.7	L3	9	L3-9-cis7-1	16	QQHYSIPRT	BBBABBbBB
L	kappa	Mus.musculus	Mo_IGKV6-17*01	98.6	Mo_IGKV6-17*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022