PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6P3R

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	61.5	H1	13	H1-13-*	-1	EASRFTSSSYWIT	BBABBBAELBBBB
A	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	100.0	H2	10	H2-10-2	15	NIKQDGSEKY	BBBAALABBB
A	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	100.0	H3	22	H3-22-*	-1	ARGflerlllgRQGAYYYGMDV
A	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	87.5	H4	8	H4-8-*	-1	RDNASNSL	BBAABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	95.7	Hu_IGKV1-39*01	90.9	L1	11	L1-11-1	8	RASQSISSSLN	BBABBAEABBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	95.7	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	15	YAASNLQS	BLLABBBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	95.7	Hu_IGKV1-39*01	71.4	L3	11	L3-11-*	-1	QQSYTMPpeLT	BBAAABaABBB
B	kappa	Homo.sapiens	Hu_IGKV1-39*01	95.7	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	5	GSGTDF	EBEABB
C	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	61.5	H1	13	H1-13-*	-1	EASRFTSSSYWIT	BBABBBBBLBBBB
C	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	100.0	H2	10	H2-10-2	17	NIKQDGSEKY	BBBAALABBB
C	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	100.0	H3	22	H3-22-*	-1	ARGflerlllgRQGAYYYGMDV
C	heavy	Homo.sapiens	Hu_IGHV3-7*01	94.5	Hu_IGHV3-7*01	87.5	H4	8	H4-8-1	13	RDNASNSL	BBAAALBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	95.7	Hu_IGKV1-39*01	90.9	L1	11	L1-11-1	6	RASQSISSSLN	BBABBAEABBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	95.7	Hu_IGKV1-39*01	87.5	L2	8	L2-8-1	11	YAASNLQS	BLLABBBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	95.7	Hu_IGKV1-39*01	71.4	L3	11	L3-11-*	-1	QQSYTMPpeLT	BBAAABaABBB
D	kappa	Homo.sapiens	Hu_IGKV1-39*01	95.7	Hu_IGKV1-39*01	100.0	L4	6	L4-6-1	8	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022