PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6ORO

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
D	heavy	Macaca.mulatta	Ma_IGHV3-9*01	90.4	Ma_IGHV3-9*01	76.9	H1	13	H1-13-*	-1	AASGFTFSSYGMN	BBABBBBAABBBB
D	heavy	Macaca.mulatta	Ma_IGHV3-9*01	90.4	Ma_IGHV3-9*01	40.0	H2	10	H2-10-*	-1	GINSGGGTKY	BBBAALAALB
D	heavy	Macaca.mulatta	Ma_IGHV3-9*01	90.4	Ma_IGHV3-9*01	100.0	H3	16	H3-16-*	-1	AKSPwgQSTSFEYFEF
D	heavy	Macaca.mulatta	Ma_IGHV3-9*01	90.4	Ma_IGHV3-9*01	75.0	H4	8	H4-8-*	-1	RDNSKNTL	BBBLALBB
E	lambda	Macaca.mulatta	Ma_IGLV3-4*01	95.4	Ma_IGLV3-4*01	72.7	L1	11	L1-11-*	-1	GGDNIGSEAVQ	EEBBBLBLBAB
E	lambda	Macaca.mulatta	Ma_IGLV3-4*01	95.4	Ma_IGLV3-4*01	75.0	L2	8	L2-8-1	25	YDDSERPS	BLLABBBB
E	lambda	Macaca.mulatta	Ma_IGLV3-4*01	95.4	Ma_IGLV3-4*01	100.0	L3	11	L3-11-*	-1	QVWDSSSDHPL	AABBBLBBABB
E	lambda	Macaca.mulatta	Ma_IGLV3-4*01	95.4	Ma_IGLV3-4*01	83.3	L4	6	L4-6-2	22	KSGNTA	BBEABB
H	heavy	Macaca.mulatta	Ma_IGHV3-9*01	90.4	Ma_IGHV3-9*01	76.9	H1	13	H1-13-*	-1	AASGFTFSSYGMN	BBABBBBAABBBB
H	heavy	Macaca.mulatta	Ma_IGHV3-9*01	90.4	Ma_IGHV3-9*01	40.0	H2	10	H2-10-*	-1	GINSGGGTKY	BBBAALAALB
H	heavy	Macaca.mulatta	Ma_IGHV3-9*01	90.4	Ma_IGHV3-9*01	100.0	H3	16	H3-16-*	-1	AKSPwgQSTSFEYFEF
H	heavy	Macaca.mulatta	Ma_IGHV3-9*01	90.4	Ma_IGHV3-9*01	75.0	H4	8	H4-8-*	-1	RDNSKNTL	BBBLALBB
J	heavy	Macaca.mulatta	Ma_IGHV3-9*01	90.4	Ma_IGHV3-9*01	76.9	H1	13	H1-13-*	-1	AASGFTFSSYGMN	BBABBBBAABBBB
J	heavy	Macaca.mulatta	Ma_IGHV3-9*01	90.4	Ma_IGHV3-9*01	40.0	H2	10	H2-10-*	-1	GINSGGGTKY	BBBAALAALB
J	heavy	Macaca.mulatta	Ma_IGHV3-9*01	90.4	Ma_IGHV3-9*01	100.0	H3	16	H3-16-*	-1	AKSPwgQSTSFEYFEF
J	heavy	Macaca.mulatta	Ma_IGHV3-9*01	90.4	Ma_IGHV3-9*01	75.0	H4	8	H4-8-*	-1	RDNSKNTL	BBBLALBB
K	lambda	Macaca.mulatta	Ma_IGLV3-4*01	95.4	Ma_IGLV3-4*01	72.7	L1	11	L1-11-*	-1	GGDNIGSEAVQ	EEBBBLBLBAB
K	lambda	Macaca.mulatta	Ma_IGLV3-4*01	95.4	Ma_IGLV3-4*01	75.0	L2	8	L2-8-1	25	YDDSERPS	BLLABBBB
K	lambda	Macaca.mulatta	Ma_IGLV3-4*01	95.4	Ma_IGLV3-4*01	100.0	L3	11	L3-11-*	-1	QVWDSSSDHPL	AABBBLBBABB
K	lambda	Macaca.mulatta	Ma_IGLV3-4*01	95.4	Ma_IGLV3-4*01	83.3	L4	6	L4-6-2	22	KSGNTA	BBEABB
L	lambda	Macaca.mulatta	Ma_IGLV3-4*01	95.4	Ma_IGLV3-4*01	72.7	L1	11	L1-11-*	-1	GGDNIGSEAVQ	EEBBBLBLBAB
L	lambda	Macaca.mulatta	Ma_IGLV3-4*01	95.4	Ma_IGLV3-4*01	75.0	L2	8	L2-8-1	25	YDDSERPS	BLLABBBB
L	lambda	Macaca.mulatta	Ma_IGLV3-4*01	95.4	Ma_IGLV3-4*01	100.0	L3	11	L3-11-*	-1	QVWDSSSDHPL	AABBBLBBABB
L	lambda	Macaca.mulatta	Ma_IGLV3-4*01	95.4	Ma_IGLV3-4*01	83.3	L4	6	L4-6-2	22	KSGNTA	BBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022