PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6OQ8

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
C	heavy	Camelus.dromedarius	Ca_IGHV1S9*01	79.5	Ca_IGHV1S9*01	30.8	H1	13	H1-13-3	10	VVTGSSFSTSTMA	BBBEAAAAABBBB
C	heavy	Camelus.dromedarius	Ca_IGHV1S9*01	79.5	Ca_IGHV1S9*01	44.4	H2	9	H2-9-1	10	SFTSGGAIK	BBBAALBBB
C	heavy	Camelus.dromedarius	Ca_IGHV1S9*01	79.5	Ca_IGHV1S9*01	0.0	H3	10	H3-10-*	-1	ALHNAVSGSS	BBBBAAAEBB
C	heavy	Camelus.dromedarius	Ca_IGHV1S9*01	79.5	Ca_IGHV1S9*01	75.0	H4	8	H4-8-1	8	RDNAKKMT	BBAAALBB
D	heavy	Camelus.dromedarius	Ca_IGHV1S9*01	79.5	Ca_IGHV1S9*01	30.8	H1	13	H1-13-3	10	VVTGSSFSTSTMA	BBBEAAAAABBBB
D	heavy	Camelus.dromedarius	Ca_IGHV1S9*01	79.5	Ca_IGHV1S9*01	44.4	H2	9	H2-9-1	10	SFTSGGAIK	BBBAALBBB
D	heavy	Camelus.dromedarius	Ca_IGHV1S9*01	79.5	Ca_IGHV1S9*01	0.0	H3	10	H3-10-*	-1	ALHNAVSGSS	BBBBAAAEBB
D	heavy	Camelus.dromedarius	Ca_IGHV1S9*01	79.5	Ca_IGHV1S9*01	75.0	H4	8	H4-8-1	8	RDNAKKMT	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022