PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6OOR

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
H	heavy	Rattus.norvegicus	Ra_IGHV5S23*01	97.2	Ra_IGHV5S23*01	84.6	H1	13	H1-13-1	15	AASGFPFNNYDMA	BBBLBBAAABBBB
H	heavy	Rattus.norvegicus	Ra_IGHV5S23*01	97.2	Ra_IGHV5S23*01	60.0	H2	10	H2-10-*	-1	SIRTGDIGTY	BBBBLLAEBB
H	heavy	Rattus.norvegicus	Ra_IGHV5S23*01	97.2	Ra_IGHV5S23*01	50.0	H3	20	H3-20-*	-1	VRPRSVYYglllrpYWFFDF
H	heavy	Rattus.norvegicus	Ra_IGHV5S23*01	97.2	Ra_IGHV5S23*01	100.0	H4	8	H4-8-1	10	RDNAKSTL	BBAAALBB
L	kappa	Rattus.norvegicus	Ra_IGKV9S1*01	97.1	Ra_IGKV9S1*01	100.0	L1	16	L1-16-1	10	RASQSLlytdgKHYLS	BBABBABBAALBBBBB
L	kappa	Rattus.norvegicus	Ra_IGKV9S1*01	97.1	Ra_IGKV9S1*01	100.0	L2	8	L2-8-1	7	YHASVRTD	BLLABBBB
L	kappa	Rattus.norvegicus	Ra_IGKV9S1*01	97.1	Ra_IGKV9S1*01	100.0	L3	9	L3-9-cis7-1	9	LQTLKSPYT	BBAABBbBB
L	kappa	Rattus.norvegicus	Ra_IGKV9S1*01	97.1	Ra_IGKV9S1*01	83.3	L4	6	L4-6-1	12	GSGSEF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022