PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6OL5

#CDRs = 8; #Clusters = 13.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
A	heavy	Mus.musculus	Mo_IGHV1-34*01	97.3	Mo_IGHV1-34*01	100.0	H1	13	H1-13-1	8	KASGYTFTDYYMH	BBBLBBAAABBBB
A	heavy	Mus.musculus	Mo_IGHV1-34*01	97.3	Mo_IGHV1-34*01	80.0	H2	10	H2-10-1	20	YFYPNNGGDG	BBBAAALBBB
A	heavy	Mus.musculus	Mo_IGHV1-34*01	97.3	Mo_IGHV1-34*01	100.0	H3	10	H3-10-*	-1	ARGGDWYFDV	BBBAaABBAB
A	heavy	Mus.musculus	Mo_IGHV1-34*01	97.3	Mo_IGHV1-34*01	87.5	H4	8	H4-8-1	6	IDKSSSTA	BBAAALBB
B	kappa	Mus.musculus	Mo_IGKV17-121*01	95.5	Mo_IGKV17-121*01	100.0	L1	11	L1-11-1	10	ITSTDIDDDMN	BBABBAEABBB
B	kappa	Mus.musculus	Mo_IGKV17-121*01	95.5	Mo_IGKV17-121*01	100.0	L2	8	L2-8-*	-1	SEGNTLRP	BBLLBBBB
B	kappa	Mus.musculus	Mo_IGKV17-121*01	95.5	Mo_IGKV17-121*01	85.7	L3	9	L3-9-cis7-1	9	LQSDNSPFT	BBAABBbBB
B	kappa	Mus.musculus	Mo_IGKV17-121*01	95.5	Mo_IGKV17-121*01	66.7	L4	6	L4-6-1	8	GFDTDF	EBEABB
H	heavy	Homo.sapiens	Hu_IGHV1-3*01	100.0	Hu_IGHV1-3*01	100.0	H1	13	H1-13-*	-1	KASGYTFTSYAMH	BBABBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV1-3*01	100.0	Hu_IGHV1-3*01	100.0	H2	10	H2-10-1	11	WINAGNGNTK	BBBAAALBBB
H	heavy	Homo.sapiens	Hu_IGHV1-3*01	100.0	Hu_IGHV1-3*01	100.0	H3	20	H3-20-*	-1	ARvgpycgGDSPQDNYYMDV
H	heavy	Homo.sapiens	Hu_IGHV1-3*01	100.0	Hu_IGHV1-3*01	100.0	H4	8	H4-8-1	8	RDTSASTA	BBAAALBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L1	12	L1-12-2	9	RASQSVSsSYLA	BBABBBBLLBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L2	8	L2-8-1	19	YGASSRAT	BLLABBBB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	85.7	L3	9	L3-9-*	-1	QQYGSSSYT	BBAABAALB
L	kappa	Homo.sapiens	Hu_IGKV3-20*01	100.0	Hu_IGKV3-20*01	100.0	L4	6	L4-6-1	11	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022