PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6OKP

#CDRs = 8; #Clusters = 14.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
K	heavy	Homo.sapiens	Hu_IGHV4-59*03	89.0	Hu_IGHV4-59*03	53.8	H1	13	H1-13-1	22	SVSGDSMNNYYWT	BBBLBBAAABBBB
K	heavy	Homo.sapiens	Hu_IGHV4-59*03	89.0	Hu_IGHV4-59*03	33.3	H2	9	H2-9-1	23	YISDRESAT	BBBAALBBB
K	heavy	Homo.sapiens	Hu_IGHV4-59*03	89.0	Hu_IGHV4-59*03	100.0	H3	26	H3-26-*	-1	ATARRGQriygvvsfgeffYYYSMDV
K	heavy	Homo.sapiens	Hu_IGHV4-59*03	89.0	Hu_IGHV4-59*03	75.0	H4	8	H4-8-1	11	RDTSKNQL	BBAAALBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*01	74.2	Hu_IGLV3-21*01	36.4	L1	11	L1-11-*	-1	GRQALGSRAVQ	BBBALEBBBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*01	74.2	Hu_IGLV3-21*01	62.5	L2	8	L2-8-1	18	YNNQDRPS	BLLABBBB
L	lambda	Homo.sapiens	Hu_IGLV3-21*01	74.2	Hu_IGLV3-21*01	44.4	L3	12	L3-12-*	-1	HMWDSRSgFSWS
L	lambda	Homo.sapiens	Hu_IGLV3-21*01	74.2	Hu_IGLV3-21*01	0.0	L4	9	L4-9-*	-1	PDinfGTRA
M	heavy	Homo.sapiens	Hu_IGHV4-61*08	86.3	None	-1.0	H1	13	H1-13-*	-1	RVSGGSLDLYYWS	BBAAEBABLBBBB
M	heavy	Homo.sapiens	Hu_IGHV4-61*08	86.3	None	-1.0	H2	10	H2-10-2	17	FVYFDGSYGD	BBBAALABBB
M	heavy	Homo.sapiens	Hu_IGHV4-61*08	86.3	Hu_IGHV4-61*08	100.0	H3	23	H3-23-*	-1	ARlgpggifdrWTGHYGDKWLDP
M	heavy	Homo.sapiens	Hu_IGHV4-61*08	86.3	Hu_IGHV4-61*08	62.5	H4	8	H4-8-1	13	ADMSKNQI	BBAAALBB
N	kappa	Homo.sapiens	Hu_IGKV3-11*02	86.8	CDRLenMismatch	-1.0	L1	12	L1-12-1	16	RASQSVSNvALA	BBABBBBAAABB
N	kappa	Homo.sapiens	Hu_IGKV3-11*02	86.8	Hu_IGKV3-11*02	62.5	L2	8	L2-8-1	14	HEASTRAT	BLLABBBB
N	kappa	Homo.sapiens	Hu_IGKV3-11*02	86.8	Hu_IGKV3-11*02	0.0	L3	6	L3-6-*	-1	QLSGRR
N	kappa	Homo.sapiens	Hu_IGKV3-11*02	86.8	Hu_IGKV3-11*02	100.0	L4	6	L4-6-1	11	GSGRDF	EBEABB
O	heavy	Homo.sapiens	Hu_IGHV4-61*08	86.3	None	-1.0	H1	13	H1-13-*	-1	RVSGGSLDLYYWS	BBAAEBABLBBBB
O	heavy	Homo.sapiens	Hu_IGHV4-61*08	86.3	None	-1.0	H2	10	H2-10-2	17	FVYFDGSYGD	BBBAALABBB
O	heavy	Homo.sapiens	Hu_IGHV4-61*08	86.3	Hu_IGHV4-61*08	100.0	H3	23	H3-23-*	-1	ARlgpggifdrWTGHYGDKWLDP
O	heavy	Homo.sapiens	Hu_IGHV4-61*08	86.3	Hu_IGHV4-61*08	62.5	H4	8	H4-8-1	13	ADMSKNQI	BBAAALBB
P	kappa	Homo.sapiens	Hu_IGKV3-11*02	86.8	CDRLenMismatch	-1.0	L1	12	L1-12-1	16	RASQSVSNvALA	BBABBBBAAABB
P	kappa	Homo.sapiens	Hu_IGKV3-11*02	86.8	Hu_IGKV3-11*02	62.5	L2	8	L2-8-1	14	HEASTRAT	BLLABBBB
P	kappa	Homo.sapiens	Hu_IGKV3-11*02	86.8	Hu_IGKV3-11*02	0.0	L3	6	L3-6-*	-1	QLSGRR
P	kappa	Homo.sapiens	Hu_IGKV3-11*02	86.8	Hu_IGKV3-11*02	100.0	L4	6	L4-6-1	11	GSGRDF	EBEABB
Q	heavy	Homo.sapiens	Hu_IGHV4-61*08	86.3	None	-1.0	H1	13	H1-13-*	-1	RVSGGSLDLYYWS	BBAAEBABLBBBB
Q	heavy	Homo.sapiens	Hu_IGHV4-61*08	86.3	None	-1.0	H2	10	H2-10-2	17	FVYFDGSYGD	BBBAALABBB
Q	heavy	Homo.sapiens	Hu_IGHV4-61*08	86.3	Hu_IGHV4-61*08	100.0	H3	23	H3-23-*	-1	ARlgpggifdrWTGHYGDKWLDP
Q	heavy	Homo.sapiens	Hu_IGHV4-61*08	86.3	Hu_IGHV4-61*08	62.5	H4	8	H4-8-1	13	ADMSKNQI	BBAAALBB
R	kappa	Homo.sapiens	Hu_IGKV3-11*02	86.8	CDRLenMismatch	-1.0	L1	12	L1-12-1	16	RASQSVSNvALA	BBABBBBAAABB
R	kappa	Homo.sapiens	Hu_IGKV3-11*02	86.8	Hu_IGKV3-11*02	62.5	L2	8	L2-8-1	14	HEASTRAT	BLLABBBB
R	kappa	Homo.sapiens	Hu_IGKV3-11*02	86.8	Hu_IGKV3-11*02	0.0	L3	6	L3-6-*	-1	QLSGRR
R	kappa	Homo.sapiens	Hu_IGKV3-11*02	86.8	Hu_IGKV3-11*02	100.0	L4	6	L4-6-1	11	GSGRDF	EBEABB

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