PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6OEJ

#CDRs = 8; #Clusters = 9.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H1	13	H1-13-1	17	AASGFTFSSYSMN	BBBLBBAAABBBB
B	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	70.0	H2	10	H2-10-*	-1	SISNTSTYIY	BBBAALBLBB
B	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H3	24	H3-24-*	-1	ARANQHfdwllsllggYHYYGMDV
B	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H4	8	H4-8-*	-1	RDNAKNSL	BBAAALBA
C	kappa	Homo.sapiens	Hu_IGKV2-28*01	97.1	Hu_IGKV2-28*01	100.0	L1	16	L1-16-*	-1	RSSQSLlhsngYNYLD	BBABBABBBLEEBBBB
C	kappa	Homo.sapiens	Hu_IGKV2-28*01	97.1	Hu_IGKV2-28*01	100.0	L2	8	L2-8-*	-1	YLGSNRAS	BLELBBBB
C	kappa	Homo.sapiens	Hu_IGKV2-28*01	97.1	Hu_IGKV2-28*01	71.4	L3	8	L3-8-1	22	MQALQAVG	BBABBEBB
C	kappa	Homo.sapiens	Hu_IGKV2-28*01	97.1	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	32	GSGTDF	EBEBBB
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H1	13	H1-13-1	23	AASGFTFSSYSMN	BBBLBBAAABBBB
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	70.0	H2	10	H2-10-*	-1	SISNTSTYIY	BBBAALBLBB
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H3	24	H3-24-*	-1	ARANQHfdwllsllggYHYYGMDV
H	heavy	Homo.sapiens	Hu_IGHV3-21*01	95.9	Hu_IGHV3-21*01	100.0	H4	8	H4-8-*	-1	RDNAKNSL	BBAAALBA
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	97.1	Hu_IGKV2-28*01	100.0	L1	16	L1-16-*	-1	RSSQSLlhsngYNYLD	BBABBBALLALBBBBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	97.1	Hu_IGKV2-28*01	100.0	L2	8	L2-8-1	18	YLGSNRAS	BLEABBBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	97.1	Hu_IGKV2-28*01	71.4	L3	8	L3-8-1	12	MQALQAVG	BBAABEBB
L	kappa	Homo.sapiens	Hu_IGKV2-28*01	97.1	Hu_IGKV2-28*01	100.0	L4	6	L4-6-1	12	GSGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022