PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6OE4

#CDRs = 8; #Clusters = 8.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Homo.sapiens	Hu_IGHV4-59*04	76.7	CDRLenMismatch	-1.0	H1	15	H1-15-1	23	TVSGASINsdNYYWT	BBBLBBAABBLBBBB
B	heavy	Homo.sapiens	Hu_IGHV4-59*04	76.7	Hu_IGHV4-59*04	55.6	H2	9	H2-9-1	8	HISYTGNTY	BBBAALBBB
B	heavy	Homo.sapiens	Hu_IGHV4-59*04	76.7	Hu_IGHV4-59*04	100.0	H3	17	H3-17-*	-1	AACGAYvliSNCGWFDS
B	heavy	Homo.sapiens	Hu_IGHV4-59*04	76.7	Hu_IGHV4-59*04	50.0	H4	8	H4-8-1	13	LETSQSQF	BBAAALBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	88.2	Hu_IGKV1-33*01	90.9	L1	11	L1-11-1	9	QASQDISTYLN	BBABBAEABBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	88.2	Hu_IGKV1-33*01	87.5	L2	8	L2-8-1	9	YGASNLET	BLLABBBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	88.2	Hu_IGKV1-33*01	71.4	L3	9	L3-9-cis7-1	8	QQYQYlPYT	BBAABBbBB
C	kappa	Homo.sapiens	Hu_IGKV1-33*01	88.2	Hu_IGKV1-33*01	83.3	L4	6	L4-6-1	9	GYGTDF	EBEABB
E	heavy	Homo.sapiens	Hu_IGHV4-59*04	76.7	CDRLenMismatch	-1.0	H1	15	H1-15-1	23	TVSGASINsdNYYWT	BBBLBBAABBLBBBB
E	heavy	Homo.sapiens	Hu_IGHV4-59*04	76.7	Hu_IGHV4-59*04	55.6	H2	9	H2-9-1	8	HISYTGNTY	BBBAALBBB
E	heavy	Homo.sapiens	Hu_IGHV4-59*04	76.7	Hu_IGHV4-59*04	100.0	H3	17	H3-17-*	-1	AACGAYvliSNCGWFDS
E	heavy	Homo.sapiens	Hu_IGHV4-59*04	76.7	Hu_IGHV4-59*04	50.0	H4	8	H4-8-1	13	LETSQSQF	BBAAALBB
F	kappa	Homo.sapiens	Hu_IGKV1-33*01	88.2	Hu_IGKV1-33*01	90.9	L1	11	L1-11-1	9	QASQDISTYLN	BBABBAEABBB
F	kappa	Homo.sapiens	Hu_IGKV1-33*01	88.2	Hu_IGKV1-33*01	87.5	L2	8	L2-8-1	9	YGASNLET	BLLABBBB
F	kappa	Homo.sapiens	Hu_IGKV1-33*01	88.2	Hu_IGKV1-33*01	71.4	L3	9	L3-9-cis7-1	8	QQYQYlPYT	BBAABBbBB
F	kappa	Homo.sapiens	Hu_IGKV1-33*01	88.2	Hu_IGKV1-33*01	83.3	L4	6	L4-6-1	9	GYGTDF	EBEABB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022