PyIgClassify2: Canonical Clusters of Antibody CDR Loop Conformations

PyIgClassify2: Classification of Antibody CDR Conformations

CDRs for query 6OCD

#CDRs = 4; #Clusters = 4.
Chain	Gene	PDB Species	Frame Germline	Frame %	CDR Germline	CDR %	CDR	Length	Cluster	Distance(°)	Sequence	Ramachandran
B	heavy	Vicugna.pacos	Al_IGHV3S63*01_VHH	90.1	Al_IGHV3S63*01_VHH	84.6	H1	13	H1-13-1	19	AASGFTLDNYNIG	BBBLBBAAABBBB
B	heavy	Vicugna.pacos	Al_IGHV3S63*01_VHH	90.1	Al_IGHV3S63*01_VHH	100.0	H2	10	H2-10-*	-1	CISSsDGSTY
B	heavy	Vicugna.pacos	Al_IGHV3S63*01_VHH	90.1	Al_IGHV3S63*01_VHH	0.0	H3	16	H3-16-*	-1	AATKYGSScpIRPYDY
B	heavy	Vicugna.pacos	Al_IGHV3S63*01_VHH	90.1	Al_IGHV3S63*01_VHH	100.0	H4	8	H4-8-1	20	RDNAKNTV	BBAAALBB
D	heavy	Vicugna.pacos	Al_IGHV3S63*01_VHH	90.1	Al_IGHV3S63*01_VHH	84.6	H1	13	H1-13-1	16	AASGFTLDNYNIG	BBBLBBAAABBBB
D	heavy	Vicugna.pacos	Al_IGHV3S63*01_VHH	90.1	Al_IGHV3S63*01_VHH	100.0	H2	10	H2-10-*	-1	CISSSDGSTY	BBBABAbBBB
D	heavy	Vicugna.pacos	Al_IGHV3S63*01_VHH	90.1	Al_IGHV3S63*01_VHH	0.0	H3	16	H3-16-*	-1	AATKYGSScpIRPYDY
D	heavy	Vicugna.pacos	Al_IGHV3S63*01_VHH	90.1	Al_IGHV3S63*01_VHH	100.0	H4	8	H4-8-1	12	RDNAKNTV	BBAAALBB

Site developed by the Antibody Team at the lab of Roland Dunbrack. Last updated on Oct. 13, 2022